DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IAPSSSITAENVSI
Uniprot ID:
P28749
Source protein:
Retinoblastoma-like protein 1
Source gene:
RBL1
Class:
DEG_ODPH_VHL_1
Location:
683:696
E3 ligase:
VHL
DEGRON score:
0.9666
ASA_SCORE:
71.5786
COIL:
0.7374
CONS_SCORE:
0.2079
DSS_SCORE:
0.3293
HELIX:
0.1164
FCONS_SCORE:
0.9904
RIG_SCORE:
0.7647
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q700L
TCGA-06-0155
GBM
TCGA
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.2222
p.Q700L
DO11292
GBM
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.2222
p.L703I
TCGA-AP-A1DV
UCEC
TCGA
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1389
p.L703I
DO229035
LICA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1389
p.L703I
DO43186
UCEC
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1389
p.S688N
TCGA-AX-A1C5
UCEC
TCGA
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.5958
p.S688N
DO41422
UCEC
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.5958
p.K682N
TCGA-AX-A2HC
UCEC
TCGA
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.3056
p.K682N
DO41572
UCEC
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.3056
p.P685S
TCGA-FS-A1ZW
SKCM
TCGA
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.6752
p.P685S
DO37519
SKCM
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.6752
p.S695L
DO1116
BRCA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.6556
p.P698H
DO229019
LICA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.2778
p.T704K
DO229025
LICA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1111
p.G678E
DO222887
MELA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1944
p.P698L
DO33392
PACA
ICGC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.2778
p.A684T
SIDM00611
Kidney Carcinoma
GDSC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.7139
p.A684T
SIDM01659
Kidney Carcinoma
GDSC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.7139
p.A684T
ACH-000313
Kidney Cancer
CCLE
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.7139
p.A684T
ACH-000684
Kidney Cancer
CCLE
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.7139
p.A684T
KMRC-1
kidney
COSMIC
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.7139
p.E677Q
ACH-000975
Lung Cancer
CCLE
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1667
p.G678R
ACH-001521
Skin Cancer
CCLE
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.1944
p.K682Q
ACH-001864
Bile Duct Cancer
CCLE
IAPSSSITAENVSI
DEG_ODPH_VHL_1
0.3056
Drug responses associated with RBL1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IAPSSSITAENVSI
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P28749
Retinoblastoma-like protein 1
DEG_ODPH_VHL_1
683:696
IAPSSSITAENVSI
VHL
0.9666
More...