DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IATPDVE
Uniprot ID:
A8MW92
Source protein:
PHD finger protein 20-like protein 1
Source gene:
PHF20L1
Class:
DEG_SCF_FBW7_2
Location:
222:228
E3 ligase:
FBXW7
DEGRON score:
0.9084
ASA_SCORE:
94.7286
COIL:
0.8503
CONS_SCORE:
0.452
DSS_SCORE:
0.5345
HELIX:
0.1151
FCONS_SCORE:
0.9939
RIG_SCORE:
0.7617
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E238K
TCGA-BT-A2LB
BLCA
TCGA
IATPDVE
DEG_SCF_FBW7_2
0.0556
p.V227I
TCGA-X6-A8C4
SARC
TCGA
IATPDVE
DEG_SCF_FBW7_2
0.5965
p.E212K
DO44098
BLCA
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.0556
p.L216H
DO4780
BRCA
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.1667
p.Q228H
DO229019
LICA
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.7582
p.V231L
DO229022
LICA
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.25
p.V215L
DO229006
LICA
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.25
p.V231I
DO220321
SARC
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.25
p.P222Q
DO47374
SKCM
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.7035
p.E230D
DO37921
SKCM
ICGC
IATPDVE
DEG_SCF_FBW7_2
0.2778
p.D226E
SIDM01298
Esophageal Carcinoma
GDSC
IATPDVE
DEG_SCF_FBW7_2
0.5647
p.T235A
ACH-000930
Breast Cancer
CCLE
IATPDVE
DEG_SCF_FBW7_2
0.1389
p.T235A
HCC1569
breast
COSMIC
IATPDVE
DEG_SCF_FBW7_2
0.1389
p.P222S
HCC1954
breast
COSMIC
IATPDVE
DEG_SCF_FBW7_2
0.6752
p.P223S
HCC1954
breast
COSMIC
IATPDVE
DEG_SCF_FBW7_2
0.6752
p.K238E
CGTH-W-1
thyroid
COSMIC
IATPDVE
DEG_SCF_FBW7_2
0.0556
Drug responses associated with PHF20L1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IATPDVE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MW92
PHD finger protein 20-like protein 1
DEG_SCF_FBW7_2
222:228
IATPDVE
FBXW7
0.9084
More...