DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IDMFSE
Uniprot ID:
Q9UI33
Source protein:
Sodium channel protein type 11 subunit alpha
Source gene:
SCN11A
Class:
LIG_APCC_ABBA_1
Location:
966:971
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9648
ASA_SCORE:
82.2667
COIL:
0.6565
CONS_SCORE:
0.324
DSS_SCORE:
0.5719
HELIX:
0.2048
FCONS_SCORE:
1.1568
RIG_SCORE:
0.7313
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R960I
TCGA-AP-A056
UCEC
TCGA
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.R960I
TCGA-D3-A2JP
SKCM
TCGA
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.R960I
DO47407
SKCM
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.R960I
DO43971
UCEC
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.P981L
TCGA-EE-A29T
SKCM
TCGA
IDMFSE
LIG_APCC_ABBA_1
0.0556
p.P981L
DO37742
SKCM
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.0556
p.R960K
TCGA-FW-A3R5
SKCM
TCGA
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.R960K
DO37406
SKCM
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.D972V
TCGA-VQ-A8PP
STAD
TCGA
IDMFSE
LIG_APCC_ABBA_1
0.3056
p.D972V
DO51774
STAD
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.3056
p.E970Q
DO219091
BLCA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.6744
p.D980N
DO888
BOCA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.0833
p.L961H
DO50092
COAD
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1944
p.P974T
DO234285
ESAD
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.25
p.Q976K
DO229034
LICA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1944
p.I978M
DO220855
MELA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1389
p.P974S
DO222753
MELA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.25
p.H975Y
DO222837
MELA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.2222
p.G964D
DO31574
OV
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.2778
p.W967L
DO37405
SKCM
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.7015
p.D960N
DO47695
SKCM
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1667
p.Q959R
DO229245
THCA
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.1389
p.P969H
DO48185
UCEC
ICGC
IDMFSE
LIG_APCC_ABBA_1
0.7694
Drug responses associated with SCN11A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IDMFSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9UI33
Sodium channel protein type 11 subunit alpha
LIG_APCC_ABBA_1
966:971
IDMFSE
APC,CDC20,FZR1
0.9648
More...