DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IDPFED
Uniprot ID:
O43426
Source protein:
Synaptojanin-1
Source gene:
SYNJ1
Class:
LIG_APCC_ABBA_1
Location:
1322:1327
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7548
ASA_SCORE:
67.0667
COIL:
0.6267
CONS_SCORE:
0.316
DSS_SCORE:
0.3695
HELIX:
0.347
FCONS_SCORE:
1.0071
RIG_SCORE:
0.8007
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T1321I
TCGA-EE-A2GO
SKCM
TCGA
IDPFED
LIG_APCC_ABBA_1
0.3056
p.E1317Q
DO51906
BLCA
ICGC
IDPFED
LIG_APCC_ABBA_1
0.1944
p.P1324S
DO8264
COAD
ICGC
IDPFED
LIG_APCC_ABBA_1
0.6752
p.L1328P
DO30080
OV
ICGC
IDPFED
LIG_APCC_ABBA_1
0.3056
p.P1319L
DO37567
SKCM
ICGC
IDPFED
LIG_APCC_ABBA_1
0.25
p.K1337N
DO41746
UCEC
ICGC
IDPFED
LIG_APCC_ABBA_1
0.1667
p.Q1316P
ACH-000153
Lung Cancer
CCLE
IDPFED
LIG_APCC_ABBA_1
0.1667
p.Q1316P
ACH-000252
Colon/Colorectal Cancer
CCLE
IDPFED
LIG_APCC_ABBA_1
0.1667
p.Q1316P
ACH-000491
Colon/Colorectal Cancer
CCLE
IDPFED
LIG_APCC_ABBA_1
0.1667
p.E1320K
ACH-000900
Lung Cancer
CCLE
IDPFED
LIG_APCC_ABBA_1
0.2778
p.E1320K
NCI-H23
lung
COSMIC
IDPFED
LIG_APCC_ABBA_1
0.2778
Drug responses associated with SYNJ1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IDPFED
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O43426
Synaptojanin-1
LIG_APCC_ABBA_1
1322:1327
IDPFED
APC,CDC20,FZR1
0.7548
More...