DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IFLTPNLS
Uniprot ID:
Q8WZ75
Source protein:
Roundabout homolog 4
Source gene:
ROBO4
Class:
DEG_SCF_FBW7_1
Location:
943:950
E3 ligase:
FBXW7
DEGRON score:
0.936
ASA_SCORE:
66.1
COIL:
0.8183
CONS_SCORE:
0.5018
DSS_SCORE:
0.2686
HELIX:
0.1053
FCONS_SCORE:
0.7345
RIG_SCORE:
0.8009
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.W954C
TCGA-EE-A2MD
SKCM
TCGA
IFLTPNLS
DEG_SCF_FBW7_1
0.2222
p.P952T
TCGA-KK-A8ID
PRAD
TCGA
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.R940W
SIDM00499
Prostate Carcinoma
GDSC
IFLTPNLS
DEG_SCF_FBW7_1
0.25
p.R940W
ACH-000956
Prostate Cancer
CCLE
IFLTPNLS
DEG_SCF_FBW7_1
0.25
p.R940W
22RV1
prostate
COSMIC
IFLTPNLS
DEG_SCF_FBW7_1
0.25
p.D941V
SIDM00043
Head and Neck Carcinoma
GDSC
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.D941V
SIDM00709
Non-Small Cell Lung Carcinoma
GDSC
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.D941V
SIDM00115
Head and Neck Carcinoma
GDSC
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.D941V
ACH-001148
Lymphoma
CCLE
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.D941V
ACH-002297
Head and Neck Cancer
CCLE
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
p.D941V
ACH-002298
Head and Neck Cancer
CCLE
IFLTPNLS
DEG_SCF_FBW7_1
0.2778
Drug responses associated with ROBO4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IFLTPNLS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WZ75
Roundabout homolog 4
DEG_SCF_FBW7_1
943:950
IFLTPNLS
FBXW7
0.936
More...