DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IFPFPD
Uniprot ID:
Q17RY0
Source protein:
Cytoplasmic polyadenylation element-binding protein 4
Source gene:
CPEB4
Class:
LIG_APCC_ABBA_1
Location:
371:376
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9797
ASA_SCORE:
69.4333
COIL:
0.904
CONS_SCORE:
0.2924
DSS_SCORE:
0.3845
HELIX:
0.0427
FCONS_SCORE:
0.9229
RIG_SCORE:
0.751
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D382N
TCGA-AN-A046
BRCA
TCGA
IFPFPD
LIG_APCC_ABBA_1
0.1667
p.D382N
TCGA-CA-6717
COAD
TCGA
IFPFPD
LIG_APCC_ABBA_1
0.1667
p.D382N
DO1285
BRCA
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.1667
p.D382N
DO8264
COAD
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.1667
p.R367M
TCGA-BF-A1PZ
SKCM
TCGA
IFPFPD
LIG_APCC_ABBA_1
0.2222
p.R367M
DO50279
SKCM
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.2222
p.R377G
TCGA-CN-A63W
HNSC
TCGA
IFPFPD
LIG_APCC_ABBA_1
0.3056
p.R377G
DO49031
HNSC
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.3056
p.R377C
TCGA-HZ-7925
PAAD
TCGA
IFPFPD
LIG_APCC_ABBA_1
0.3056
p.R377C
DO32778
PAAD
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.3056
p.D369G
DO228125
EOPC
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.2778
p.M361I
DO228991
LICA
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.0556
p.R377H
DO228419
MALY
ICGC
IFPFPD
LIG_APCC_ABBA_1
0.3056
p.F374V
SIDM01175
Other Sarcomas
GDSC
IFPFPD
LIG_APCC_ABBA_1
0.7068
p.F374V
ACH-002309
Sarcoma
CCLE
IFPFPD
LIG_APCC_ABBA_1
0.7068
p.F374V
SW684
soft_tissue
COSMIC
IFPFPD
LIG_APCC_ABBA_1
0.7068
p.S364G
SIDM00068
Colorectal Carcinoma
GDSC
IFPFPD
LIG_APCC_ABBA_1
0.1389
p.A368T
ACH-000999
Colon/Colorectal Cancer
CCLE
IFPFPD
LIG_APCC_ABBA_1
0.25
Drug responses associated with CPEB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IFPFPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q17RY0
Cytoplasmic polyadenylation element-binding protein 4
LIG_APCC_ABBA_1
371:376
IFPFPD
APC,CDC20,FZR1
0.9797
More...