DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IFSTPSSS
Uniprot ID:
Q13492
Source protein:
Phosphatidylinositol-binding clathrin assembly protein
Source gene:
PICALM
Class:
DEG_SCF_FBW7_1
Location:
376:383
E3 ligase:
FBXW7
DEGRON score:
0.9993
ASA_SCORE:
70.9625
COIL:
0.9244
CONS_SCORE:
0.2944
DSS_SCORE:
0.474
HELIX:
0.0418
FCONS_SCORE:
0.9875
RIG_SCORE:
0.6704
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.M369L
TCGA-AP-A059
UCEC
TCGA
IFSTPSSS
DEG_SCF_FBW7_1
0.1389
p.M369L
DO41361
UCEC
ICGC
IFSTPSSS
DEG_SCF_FBW7_1
0.1389
p.A371V
TCGA-B5-A3FA
UCEC
TCGA
IFSTPSSS
DEG_SCF_FBW7_1
0.1944
p.A371V
DO52402
UCEC
ICGC
IFSTPSSS
DEG_SCF_FBW7_1
0.1944
p.S378T
TCGA-VQ-A8PC
STAD
TCGA
IFSTPSSS
DEG_SCF_FBW7_1
0.6005
p.S378T
DO51767
STAD
ICGC
IFSTPSSS
DEG_SCF_FBW7_1
0.6005
p.S381G
SIDM00780
Colorectal Carcinoma
GDSC
IFSTPSSS
DEG_SCF_FBW7_1
0.6993
p.S381G
ACH-000967
Colon/Colorectal Cancer
CCLE
IFSTPSSS
DEG_SCF_FBW7_1
0.6993
p.I376M
ACH-000272
Kidney Cancer
CCLE
IFSTPSSS
DEG_SCF_FBW7_1
0.6507
p.L384P
KYSE-180
oesophagus
COSMIC
IFSTPSSS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PICALM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IFSTPSSS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q13492
Phosphatidylinositol-binding clathrin assembly protein
DEG_SCF_FBW7_1
376:383
IFSTPSSS
FBXW7
0.9993
More...