DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
IGPYGE
Uniprot ID:
Q8TBC3
Source protein:
SH3KBP1-binding protein 1
Source gene:
SHKBP1
Class:
LIG_APCC_ABBA_1
Location:
497:502
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8501
ASA_SCORE:
54.1833
COIL:
0.7582
CONS_SCORE:
0.8234
DSS_SCORE:
0.4954
HELIX:
0.1185
FCONS_SCORE:
1.324
RIG_SCORE:
0.6924
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N495D
TCGA-AP-A1DR
UCEC
TCGA
IGPYGE
LIG_APCC_ABBA_1
0.2778
p.A493T
TCGA-CG-4306
STAD
TCGA
IGPYGE
LIG_APCC_ABBA_1
0.2222
p.P499H
TCGA-EE-A2GH
SKCM
TCGA
IGPYGE
LIG_APCC_ABBA_1
0.7694
p.G490S
TCGA-HT-8018
LGG
TCGA
IGPYGE
LIG_APCC_ABBA_1
0.1389
p.D505N
TCGA-YD-A9TA
SKCM
TCGA
IGPYGE
LIG_APCC_ABBA_1
0.25
p.D505N
SIDM01130
Squamous Cell Lung Carcinoma
GDSC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.D505N
NCI-H520
lung
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.R505W
DO4749
BRCA
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.R505W
DO22237
LGG
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.R505W
QGP-1
pancreas
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.R505W
HSC-39
stomach
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.R498H
DO8447
COAD
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.8244
p.R498C
DO233624
GACA
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.8301
p.R498C
SNU-175
large_intestine
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.8301
p.Q494K
DO20872
KIRP
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.25
p.V509L
DO52311
LIHC
ICGC
IGPYGE
LIG_APCC_ABBA_1
0.1389
p.S492N
SIDM00247
Gastric Carcinoma
GDSC
IGPYGE
LIG_APCC_ABBA_1
0.1944
p.S492N
ACH-000356
Gastric Cancer
CCLE
IGPYGE
LIG_APCC_ABBA_1
0.1944
p.S492N
MKN45
stomach
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.1944
p.V497M
639-V
urinary_tract
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.7208
p.C507R
HCT-116
large_intestine
COSMIC
IGPYGE
LIG_APCC_ABBA_1
0.1944
Drug responses associated with SHKBP1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IGPYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TBC3
SH3KBP1-binding protein 1
LIG_APCC_ABBA_1
497:502
IGPYGE
APC,CDC20,FZR1
0.8501
More...