DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IKENV
Uniprot ID:
Q92750
Source protein:
Transcription initiation factor TFIID subunit 4B
Source gene:
TAF4B
Class:
DEG_APCC_KENBOX_2
Location:
602:606
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9209
ASA_SCORE:
98.66
COIL:
0.773
CONS_SCORE:
0.3939
DSS_SCORE:
0.4672
HELIX:
0.1276
FCONS_SCORE:
0.8376
RIG_SCORE:
0.7645
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Q598R
TCGA-5M-AAT6
COAD
TCGA
IKENV
DEG_APCC_KENBOX_2
0.2222
p.I602T
TCGA-BH-A8FY
BRCA
TCGA
IKENV
DEG_APCC_KENBOX_2
0.5966
p.I607T
DO219613
BRCA
ICGC
IKENV
DEG_APCC_KENBOX_2
0.3056
p.Q603R
DO223703
COAD
ICGC
IKENV
DEG_APCC_KENBOX_2
0.7329
p.A599T
DO228756
GACA
ICGC
IKENV
DEG_APCC_KENBOX_2
0.6944
p.S596L
DO14156
HNSC
ICGC
IKENV
DEG_APCC_KENBOX_2
0.1667
p.R616L
DO229028
LICA
ICGC
IKENV
DEG_APCC_KENBOX_2
0.0556
p.T612K
DO50859
LIRI
ICGC
IKENV
DEG_APCC_KENBOX_2
0.1667
Drug responses associated with TAF4B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IKENV
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92750
Transcription initiation factor TFIID subunit 4B
DEG_APCC_KENBOX_2
602:606
IKENV
APC,CDC20,FZR1
0.9209
More...