DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
ILVFPE
Uniprot ID:
Q7L5N7
Source protein:
Lysophosphatidylcholine acyltransferase 2
Source gene:
LPCAT2
Class:
LIG_APCC_ABBA_1
Location:
215:220
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7364
ASA_SCORE:
48.0333
COIL:
0.6033
CONS_SCORE:
0.7684
DSS_SCORE:
0.328
HELIX:
0.0377
FCONS_SCORE:
1.3788
RIG_SCORE:
0.8777
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.I230F
TCGA-A6-6780
COAD
TCGA
ILVFPE
LIG_APCC_ABBA_1
0.0556
p.I230F
DO10244
COAD
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.0556
p.S208T
TCGA-D8-A1XK
BRCA
TCGA
ILVFPE
LIG_APCC_ABBA_1
0.1389
p.S208T
DO4749
BRCA
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.1389
p.W212L
TCGA-DA-A1I1
SKCM
TCGA
ILVFPE
LIG_APCC_ABBA_1
0.25
p.W212L
DO37966
SKCM
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.25
p.R226C
TCGA-DA-A95X
SKCM
TCGA
ILVFPE
LIG_APCC_ABBA_1
0.1667
p.R226C
DO219480
SKCM
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.1667
p.S208P
TCGA-FI-A2D6
UCEC
TCGA
ILVFPE
LIG_APCC_ABBA_1
0.1389
p.S208P
DO43867
UCEC
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.1389
p.W212C
DO229045
LICA
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.25
p.T206I
DO231127
LUSC
ICGC
ILVFPE
LIG_APCC_ABBA_1
0.0833
Drug responses associated with LPCAT2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ILVFPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7L5N7
Lysophosphatidylcholine acyltransferase 2
LIG_APCC_ABBA_1
215:220
ILVFPE
APC,CDC20,FZR1
0.7364
More...