DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
INGTPVRT
Uniprot ID:
P53671
Source protein:
LIM domain kinase 2
Source gene:
LIMK2
Class:
DEG_SCF_FBW7_1
Location:
207:214
E3 ligase:
FBXW7
DEGRON score:
0.9887
ASA_SCORE:
76.2375
COIL:
0.7614
CONS_SCORE:
0.5062
DSS_SCORE:
0.3629
HELIX:
0.035
FCONS_SCORE:
1.072
RIG_SCORE:
0.7473
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E200D
TCGA-A6-2686
COAD
TCGA
INGTPVRT
DEG_SCF_FBW7_1
0.1389
p.E200D
DO7828
COAD
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.1389
p.R222C
TCGA-B5-A3FC
UCEC
TCGA
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.R222C
DO41871
UCEC
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.R222C
SIDM00388
B-Cell Non-Hodgkin's Lymphoma
GDSC
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.R222C
MHH-PREB-1
haematopoietic_and_lymphoid_tissue
COSMIC
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.T206M
TCGA-D1-A17B
UCEC
TCGA
INGTPVRT
DEG_SCF_FBW7_1
0.3056
p.T206M
DO43017
UCEC
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.3056
p.E198D
TCGA-EI-6507
READ
TCGA
INGTPVRT
DEG_SCF_FBW7_1
0.0833
p.E198D
DO36675
READ
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.0833
p.R222H
TCGA-EO-A22U
UCEC
TCGA
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.R222H
DO43755
UCEC
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.D216N
DO223703
COAD
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.2778
p.R222L
DO228971
LICA
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.1111
p.D217Y
DO229006
LICA
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.25
p.H209R
DO23525
LIRI
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.8244
p.T209R
DO222632
MELA
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.7876
p.L212V
DO49136
PACA
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.6765
p.H209N
DO36228
PRAD
ICGC
INGTPVRT
DEG_SCF_FBW7_1
0.7423
p.R203H
ACH-000360
Colon/Colorectal Cancer
CCLE
INGTPVRT
DEG_SCF_FBW7_1
0.2222
p.R203H
NCI-H508
large_intestine
COSMIC
INGTPVRT
DEG_SCF_FBW7_1
0.2222
Drug responses associated with LIMK2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of INGTPVRT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53671
LIM domain kinase 2
DEG_SCF_FBW7_1
207:214
INGTPVRT
FBXW7
0.9887
More...