DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
INTPVAE
Uniprot ID:
Q5TB30
Source protein:
DEP domain-containing protein 1A
Source gene:
DEPDC1
Class:
DEG_SCF_FBW7_2
Location:
525:531
E3 ligase:
FBXW7
DEGRON score:
0.9159
ASA_SCORE:
75.0429
COIL:
0.6481
CONS_SCORE:
0.3544
DSS_SCORE:
0.407
HELIX:
0.0821
FCONS_SCORE:
1.1855
RIG_SCORE:
0.7992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N537I
TCGA-CC-A9FU
LIHC
TCGA
INTPVAE
DEG_SCF_FBW7_2
0.1667
p.N537I
DO52190
LIHC
ICGC
INTPVAE
DEG_SCF_FBW7_2
0.1667
p.M534I
TCGA-MP-A4TK
LUAD
TCGA
INTPVAE
DEG_SCF_FBW7_2
0.25
p.M534I
DO45384
LUAD
ICGC
INTPVAE
DEG_SCF_FBW7_2
0.25
p.Y524C
DO229232
THCA
ICGC
INTPVAE
DEG_SCF_FBW7_2
0.3056
p.T527I
SIDM00789
Colorectal Carcinoma
GDSC
INTPVAE
DEG_SCF_FBW7_2
0.7078
p.T527I
ACH-000997
Colon/Colorectal Cancer
CCLE
INTPVAE
DEG_SCF_FBW7_2
0.7078
p.T527I
ACH-001061
Colon/Colorectal Cancer
CCLE
INTPVAE
DEG_SCF_FBW7_2
0.7078
p.T527I
HCT-15
large_intestine
COSMIC
INTPVAE
DEG_SCF_FBW7_2
0.7078
p.K522E
SW620
large_intestine
COSMIC
INTPVAE
DEG_SCF_FBW7_2
0.25
Drug responses associated with DEPDC1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of INTPVAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5TB30
DEP domain-containing protein 1A
DEG_SCF_FBW7_2
525:531
INTPVAE
FBXW7
0.9159
More...