DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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Degron:
INVHED
Uniprot ID:
Q96PY6
Source protein:
Serine/threonine-protein kinase Nek1
Source gene:
NEK1
Class:
LIG_APCC_ABBA_1
Location:
738:743
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9617
ASA_SCORE:
98.5833
COIL:
0.5498
CONS_SCORE:
0.4208
DSS_SCORE:
0.5614
HELIX:
0.4303
FCONS_SCORE:
1.0127
RIG_SCORE:
0.743
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R742C
TCGA-YG-AA3O
SKCM
TCGA
INVHED
LIG_APCC_ABBA_1
0.8301
p.R741C
DO51734
COAD
ICGC
INVHED
LIG_APCC_ABBA_1
0.8301
p.R741C
DO43186
UCEC
ICGC
INVHED
LIG_APCC_ABBA_1
0.8301
p.R742H
ACH-000520
Ovarian Cancer
CCLE
INVHED
LIG_APCC_ABBA_1
0.8244
p.R741H
PF-382
haematopoietic_and_lymphoid_tissue
COSMIC
INVHED
LIG_APCC_ABBA_1
0.8244
p.S739F
HCC2998
large_intestine
COSMIC
INVHED
LIG_APCC_ABBA_1
0.7982
p.N747D
SIDM01619
Endometrial Carcinoma
GDSC
INVHED
LIG_APCC_ABBA_1
0.2222
p.L751I
COR-L95
lung
COSMIC
INVHED
LIG_APCC_ABBA_1
0.2222
p.E752G
DO229013
COCA
ICGC
INVHED
LIG_APCC_ABBA_1
0.0833
p.E752G
DO229003
COCA
ICGC
INVHED
LIG_APCC_ABBA_1
0.0833
p.E752G
DO229005
COCA
ICGC
INVHED
LIG_APCC_ABBA_1
0.0833
p.E752G
DO228941
LICA
ICGC
INVHED
LIG_APCC_ABBA_1
0.0833
p.D753Y
TCGA-CA-6717
COAD
TCGA
INVHED
LIG_APCC_ABBA_1
0.0556
p.L753R
DOHH-2
haematopoietic_and_lymphoid_tissue
COSMIC
INVHED
LIG_APCC_ABBA_1
0.0556
p.E728D
GAK
skin
COSMIC
INVHED
LIG_APCC_ABBA_1
0.0556
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Drug responses associated with NEK1 mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of INVHED
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96PY6
Serine/threonine-protein kinase Nek1
LIG_APCC_ABBA_1
738:743
INVHED
APC,CDC20,FZR1
0.9617
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