DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPAAAVPPM
Uniprot ID:
O94854
Source protein:
Microtubule-actin cross-linking factor 1, isoforms 6/7
Source gene:
MACF1
Class:
DEG_SIAH_1
Location:
1185:1193
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9956
ASA_SCORE:
84.6778
COIL:
0.9657
CONS_SCORE:
0.3002
DSS_SCORE:
0.3869
HELIX:
0.0159
FCONS_SCORE:
0.9083
RIG_SCORE:
0.7267
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A1184V
TCGA-A8-A09Z
BRCA
TCGA
IPAAAVPPM
DEG_SIAH_1
0.3056
p.A1184V
DO5521
BRCA
ICGC
IPAAAVPPM
DEG_SIAH_1
0.3056
p.A1184V
ACH-000998
Colon/Colorectal Cancer
CCLE
IPAAAVPPM
DEG_SIAH_1
0.3056
p.V1182M
TCGA-BA-6873
HNSC
TCGA
IPAAAVPPM
DEG_SIAH_1
0.25
p.V1182M
DO14242
HNSC
ICGC
IPAAAVPPM
DEG_SIAH_1
0.25
p.P1198T
TCGA-DA-A1I1
SKCM
TCGA
IPAAAVPPM
DEG_SIAH_1
0.1944
p.P1198T
DO37966
SKCM
ICGC
IPAAAVPPM
DEG_SIAH_1
0.1944
p.S1197F
TCGA-EB-A553
SKCM
TCGA
IPAAAVPPM
DEG_SIAH_1
0.2222
p.S1197F
DO47329
SKCM
ICGC
IPAAAVPPM
DEG_SIAH_1
0.2222
p.E1194D
TCGA-EE-A2GT
SKCM
TCGA
IPAAAVPPM
DEG_SIAH_1
0.3056
p.E1194D
DO37946
SKCM
ICGC
IPAAAVPPM
DEG_SIAH_1
0.3056
p.E1194D
ACH-000997
Colon/Colorectal Cancer
CCLE
IPAAAVPPM
DEG_SIAH_1
0.3056
p.P1202H
TCGA-EE-A2MG
SKCM
TCGA
IPAAAVPPM
DEG_SIAH_1
0.0833
p.P1202H
DO37421
SKCM
ICGC
IPAAAVPPM
DEG_SIAH_1
0.0833
p.M1193V
DO230968
LUSC
ICGC
IPAAAVPPM
DEG_SIAH_1
0.6097
p.M1193V
DO224621
LUSC
ICGC
IPAAAVPPM
DEG_SIAH_1
0.6097
p.A1189V
ACH-000980
Lung Cancer
CCLE
IPAAAVPPM
DEG_SIAH_1
0.5825
Drug responses associated with MACF1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPAAAVPPM
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O94854
Microtubule-actin cross-linking factor 1, isoforms 6/7
DEG_SIAH_1
1185:1193
IPAAAVPPM
SIAH1,SIAH2,SIAH3
0.9956
More...