DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPMTPTST
Uniprot ID:
Q92908
Source protein:
Transcription factor GATA-6
Source gene:
GATA6
Class:
DEG_SCF_FBW7_1
Location:
512:519
E3 ligase:
FBXW7
DEGRON score:
0.9985
ASA_SCORE:
104.575
COIL:
0.9724
CONS_SCORE:
0.4458
DSS_SCORE:
0.6495
HELIX:
0.0095
FCONS_SCORE:
1.164
RIG_SCORE:
0.5992
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N529K
TCGA-12-0688
GBM
TCGA
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529K
DO11088
GBM
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529K
SIDM00193
Colorectal Carcinoma
GDSC
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529K
ACH-000991
Colon/Colorectal Cancer
CCLE
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529K
SNU-81
large_intestine
COSMIC
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529H
TCGA-64-1679
LUAD
TCGA
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.N529H
DO26200
LUAD
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.0556
p.P516L
TCGA-64-5781
LUAD
TCGA
IPMTPTST
DEG_SCF_FBW7_1
0.7582
p.P516L
DO23740
LUAD
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.7582
p.T503S
TCGA-BR-6452
STAD
TCGA
IPMTPTST
DEG_SCF_FBW7_1
0.0833
p.T503S
DO38404
STAD
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.0833
p.I512T
DO48404
BLCA
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.7078
p.D525N
DO222838
BTCA
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.1667
p.M514I
DO222838
BTCA
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.6507
p.T517A
DO233766
GACA
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.6028
p.C504F
DO229027
LICA
ICGC
IPMTPTST
DEG_SCF_FBW7_1
0.1111
p.K502M
SIDM01118
Small Cell Lung Carcinoma
GDSC
IPMTPTST
DEG_SCF_FBW7_1
0.1667
p.K502M
ACH-002175
Lung Cancer
CCLE
IPMTPTST
DEG_SCF_FBW7_1
0.1667
p.K502M
NCI-H740
lung
COSMIC
IPMTPTST
DEG_SCF_FBW7_1
0.1667
p.P513H
SIDM01739
Small Cell Lung Carcinoma
GDSC
IPMTPTST
DEG_SCF_FBW7_1
0.6583
p.P513H
ACH-000297
Lung Cancer
CCLE
IPMTPTST
DEG_SCF_FBW7_1
0.6583
p.T517I
ACH-001389
Breast Cancer
CCLE
IPMTPTST
DEG_SCF_FBW7_1
0.5966
Drug responses associated with GATA6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPMTPTST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q92908
Transcription factor GATA-6
DEG_SCF_FBW7_1
512:519
IPMTPTST
FBXW7
0.9985
More...