DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
IPPFHD
Uniprot ID:
P0C875
Source protein:
Protein FAM228B
Source gene:
FAM228B
Class:
LIG_APCC_ABBA_1
Location:
150:155
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9873
ASA_SCORE:
61.8667
COIL:
0.8458
CONS_SCORE:
0.4544
DSS_SCORE:
0.3688
HELIX:
0.0688
FCONS_SCORE:
1.2149
RIG_SCORE:
0.7702
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.N144H
TCGA-AZ-4315
COAD
TCGA
IPPFHD
LIG_APCC_ABBA_1
0.1667
p.N144H
DO8842
COAD
ICGC
IPPFHD
LIG_APCC_ABBA_1
0.1667
p.N144K
DO222602
COCA
ICGC
IPPFHD
LIG_APCC_ABBA_1
0.1667
p.F145Y
DO229456
SKCA
ICGC
IPPFHD
LIG_APCC_ABBA_1
0.1944
p.D165E
SIDM00330
Neuroblastoma
GDSC
IPPFHD
LIG_APCC_ABBA_1
0.0556
p.D165E
LAN-6
autonomic_ganglia
COSMIC
IPPFHD
LIG_APCC_ABBA_1
0.0556
p.L157S
SIDM00087
Plasma Cell Myeloma
GDSC
IPPFHD
LIG_APCC_ABBA_1
0.2778
p.L157S
RPMI-8226
haematopoietic_and_lymphoid_tissue
COSMIC
IPPFHD
LIG_APCC_ABBA_1
0.2778
p.Q161K
SIDM00655
Other Solid Cancers
GDSC
IPPFHD
LIG_APCC_ABBA_1
0.1667
p.Q161K
NCCIT
testis
COSMIC
IPPFHD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with FAM228B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPPFHD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P0C875
Protein FAM228B
LIG_APCC_ABBA_1
150:155
IPPFHD
APC,CDC20,FZR1
0.9873
More...