DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPPTPLPT
Uniprot ID:
Q06481
Source protein:
Amyloid beta precursor like protein 2
Source gene:
APLP2
Class:
DEG_SCF_FBW7_1
Location:
364:371
E3 ligase:
FBXW7
DEGRON score:
0.6282
ASA_SCORE:
68.15
COIL:
0.9138
CONS_SCORE:
0.354
DSS_SCORE:
0.1995
HELIX:
0.0223
FCONS_SCORE:
1.1224
RIG_SCORE:
0.7312
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A358T
TCGA-3A-A9J0
PAAD
TCGA
IPPTPLPT
DEG_SCF_FBW7_1
0.1667
p.C356S
TCGA-55-7994
LUAD
TCGA
IPPTPLPT
DEG_SCF_FBW7_1
0.1111
p.A362V
TCGA-DF-A2KU
UCEC
TCGA
IPPTPLPT
DEG_SCF_FBW7_1
0.2778
p.A362V
SIDM00216
Colorectal Carcinoma
GDSC
IPPTPLPT
DEG_SCF_FBW7_1
0.2778
p.A362V
ACH-000989
Colon/Colorectal Cancer
CCLE
IPPTPLPT
DEG_SCF_FBW7_1
0.2778
p.A362V
ACH-001369
Ovarian Cancer
CCLE
IPPTPLPT
DEG_SCF_FBW7_1
0.2778
p.A362V
SNU-175
large_intestine
COSMIC
IPPTPLPT
DEG_SCF_FBW7_1
0.2778
p.P366A
TCGA-VS-A9UH
CESC
TCGA
IPPTPLPT
DEG_SCF_FBW7_1
0.6392
p.V359M
DO10886
GBM
ICGC
IPPTPLPT
DEG_SCF_FBW7_1
0.1944
p.P368L
DO222714
MELA
ICGC
IPPTPLPT
DEG_SCF_FBW7_1
0.7582
p.P369Q
DO37543
SKCM
ICGC
IPPTPLPT
DEG_SCF_FBW7_1
0.7035
p.E363Q
HT-1197
urinary_tract
COSMIC
IPPTPLPT
DEG_SCF_FBW7_1
0.3056
p.A372V
SNU-175
large_intestine
COSMIC
IPPTPLPT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with APLP2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPPTPLPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q06481
Amyloid beta precursor like protein 2
DEG_SCF_FBW7_1
364:371
IPPTPLPT
FBXW7
0.6282
More...