DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPPYGD
Uniprot ID:
Q6V0I7
Source protein:
Protocadherin Fat 4
Source gene:
FAT4
Class:
LIG_APCC_ABBA_1
Location:
4562:4567
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9577
ASA_SCORE:
72.0167
COIL:
0.874
CONS_SCORE:
0.2544
DSS_SCORE:
0.7017
HELIX:
0.0697
FCONS_SCORE:
0.8917
RIG_SCORE:
0.6449
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T4570I
TCGA-AY-6386
COAD
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.25
p.G4577E
TCGA-BF-AAOX
SKCM
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.0556
p.F4556C
TCGA-CA-6717
COAD
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.1667
p.D4560E
TCGA-D5-6530
COAD
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.2778
p.P4564S
TCGA-EB-A41A
SKCM
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.6752
p.P4559L
TCGA-EB-A6QZ
SKCM
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.25
p.D4557N
TCGA-OD-A75X
SKCM
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.1944
p.P4564L
TCGA-YD-A89C
SKCM
TCGA
IPPYGD
LIG_APCC_ABBA_1
0.6471
p.P4564L
ACH-001566
Skin Cancer
CCLE
IPPYGD
LIG_APCC_ABBA_1
0.6471
p.E4552K
SIDM00860
Head and Neck Carcinoma
GDSC
IPPYGD
LIG_APCC_ABBA_1
0.0556
p.E4552K
ACH-000846
Head and Neck Cancer
CCLE
IPPYGD
LIG_APCC_ABBA_1
0.0556
p.E4552K
FADU
upper_aerodigestive_tract
COSMIC
IPPYGD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with FAT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPPYGD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q6V0I7
Protocadherin Fat 4
LIG_APCC_ABBA_1
4562:4567
IPPYGD
APC,CDC20,FZR1
0.9577
More...