DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPPYVD
Uniprot ID:
P48634
Source protein:
Protein PRRC2A
Source gene:
PRRC2A
Class:
LIG_APCC_ABBA_1
Location:
726:731
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8824
ASA_SCORE:
107.4833
COIL:
0.9767
CONS_SCORE:
0.6824
DSS_SCORE:
0.3295
HELIX:
0.0138
FCONS_SCORE:
0.9761
RIG_SCORE:
0.8033
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R722L
TCGA-33-4587
LUSC
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.R722L
DO27683
LUSC
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.G737C
TCGA-44-2657
LUAD
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.1667
p.G737C
DO25020
LUAD
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.1667
p.D720N
TCGA-78-7150
LUAD
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.1667
p.D720N
DO24411
LUAD
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.1667
p.P728L
TCGA-BF-A5EO
SKCM
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.6471
p.P728L
DO219450
SKCM
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.6471
p.R722Q
TCGA-BR-6852
STAD
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.R722Q
DO38202
STAD
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.P728S
TCGA-CN-6992
HNSC
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.6752
p.P728S
DO14606
HNSC
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.6752
p.Q736H
TCGA-D3-A2JC
SKCM
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.1944
p.Q736H
DO47578
SKCM
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.1944
p.L735F
TCGA-DA-A95Z
SKCM
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.L735F
DO219481
SKCM
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.2222
p.P727S
TCGA-DD-A1EJ
LIHC
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.5641
p.P727S
DO22994
LIHC
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.5641
p.L741I
TCGA-EE-A2MJ
SKCM
TCGA
IPPYVD
LIG_APCC_ABBA_1
0.0556
p.L741I
DO38099
SKCM
ICGC
IPPYVD
LIG_APCC_ABBA_1
0.0556
Drug responses associated with PRRC2A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPPYVD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P48634
Protein PRRC2A
LIG_APCC_ABBA_1
726:731
IPPYVD
APC,CDC20,FZR1
0.8824
More...