DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPSAIVLPN
Uniprot ID:
Q8NFY4
Source protein:
Semaphorin-6D
Source gene:
SEMA6D
Class:
DEG_SIAH_1
Location:
824:832
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9437
ASA_SCORE:
48.7444
COIL:
0.7654
CONS_SCORE:
0.3549
DSS_SCORE:
0.5253
HELIX:
0.0702
FCONS_SCORE:
0.9421
RIG_SCORE:
0.6781
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D836Y
TCGA-05-4418
LUAD
TCGA
IPSAIVLPN
DEG_SIAH_1
0.2222
p.L830V
TCGA-14-0866
GBM
TCGA
IPSAIVLPN
DEG_SIAH_1
0.5654
p.P818S
TCGA-18-5592
LUSC
TCGA
IPSAIVLPN
DEG_SIAH_1
0.1667
p.P818S
TCGA-DU-A6S3
LGG
TCGA
IPSAIVLPN
DEG_SIAH_1
0.1667
p.A827D
TCGA-19-5956
GBM
TCGA
IPSAIVLPN
DEG_SIAH_1
0.7793
p.N838S
TCGA-50-5049
LUAD
TCGA
IPSAIVLPN
DEG_SIAH_1
0.1667
p.T834I
TCGA-D1-A17Q
UCEC
TCGA
IPSAIVLPN
DEG_SIAH_1
0.2778
p.T839M
TCGA-DU-6392
LGG
TCGA
IPSAIVLPN
DEG_SIAH_1
0.1389
p.T839M
SIDM00322
Esophageal Squamous Cell Carcinoma
GDSC
IPSAIVLPN
DEG_SIAH_1
0.1389
p.T839M
SIDM00860
Head and Neck Carcinoma
GDSC
IPSAIVLPN
DEG_SIAH_1
0.1389
p.T839M
FADU
upper_aerodigestive_tract
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.1389
p.T839M
T-T
oesophagus
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.1389
p.P831H
DO8842
COAD
ICGC
IPSAIVLPN
DEG_SIAH_1
0.7694
p.M840I
DO8264
COAD
ICGC
IPSAIVLPN
DEG_SIAH_1
0.1111
p.G836E
DO26444
LUSC
ICGC
IPSAIVLPN
DEG_SIAH_1
0.2222
p.M840V
DO27937
ORCA
ICGC
IPSAIVLPN
DEG_SIAH_1
0.1111
p.N828T
DO42745
UCEC
ICGC
IPSAIVLPN
DEG_SIAH_1
0.7055
p.H823Y
SIDM00946
T-Lymphoblastic Leukemia
GDSC
IPSAIVLPN
DEG_SIAH_1
0.3056
p.H823Y
ACH-000981
Leukemia
CCLE
IPSAIVLPN
DEG_SIAH_1
0.3056
p.H823Y
DND-41
haematopoietic_and_lymphoid_tissue
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.3056
p.L834Q
HT55
large_intestine
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.2778
p.S829N
KYAE-1
oesophagus
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.7069
p.S816N
KYAE-1
oesophagus
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.1111
p.S835N
KYAE-1
oesophagus
COSMIC
IPSAIVLPN
DEG_SIAH_1
0.25
Drug responses associated with SEMA6D mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPSAIVLPN
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NFY4
Semaphorin-6D
DEG_SIAH_1
824:832
IPSAIVLPN
SIAH1,SIAH2,SIAH3
0.9437
More...