DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPTPLMS
Uniprot ID:
Q8NET4
Source protein:
Retrotransposon Gag-like protein 9
Source gene:
RTL9
Class:
DEG_SCF_FBW7_1
Location:
294:300
E3 ligase:
FBXW7
DEGRON score:
0.9867
ASA_SCORE:
87.6714
COIL:
0.9163
CONS_SCORE:
0.4889
DSS_SCORE:
0.6261
HELIX:
0.0313
FCONS_SCORE:
1.1874
RIG_SCORE:
0.7003
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G293R
SIDM00522
Small Cell Lung Carcinoma
GDSC
IPTPLMS
DEG_SCF_FBW7_1
0.3056
p.G293R
SIDM00140
Melanoma
GDSC
IPTPLMS
DEG_SCF_FBW7_1
0.3056
p.G293R
DMS-273
lung
COSMIC
IPTPLMS
DEG_SCF_FBW7_1
0.3056
p.G293R
COLO-792
skin
COSMIC
IPTPLMS
DEG_SCF_FBW7_1
0.3056
p.G293E
SIDM00221
Melanoma
GDSC
IPTPLMS
DEG_SCF_FBW7_1
0.3056
p.S287N
HCT-15
large_intestine
COSMIC
IPTPLMS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with RTL9 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPTPLMS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8NET4
Retrotransposon Gag-like protein 9
DEG_SCF_FBW7_1
294:300
IPTPLMS
FBXW7
0.9867
More...