DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPTPTMT
Uniprot ID:
O15018
Source protein:
PDZ domain-containing protein 2
Source gene:
PDZD2
Class:
DEG_SCF_FBW7_1
Location:
2451:2457
E3 ligase:
FBXW7
DEGRON score:
0.987
ASA_SCORE:
91.7143
COIL:
0.9246
CONS_SCORE:
0.2713
DSS_SCORE:
0.6342
HELIX:
0.0391
FCONS_SCORE:
0.779
RIG_SCORE:
0.679
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K2463R
TCGA-56-8626
LUSC
TCGA
IPTPTMT
DEG_SCF_FBW7_1
0.2778
p.K2463R
DO45506
LUSC
ICGC
IPTPTMT
DEG_SCF_FBW7_1
0.2778
p.G2450R
TCGA-EE-A2GM
SKCM
TCGA
IPTPTMT
DEG_SCF_FBW7_1
0.3056
p.G2450R
DO37555
SKCM
ICGC
IPTPTMT
DEG_SCF_FBW7_1
0.3056
p.M2456I
TCGA-EW-A1PH
BRCA
TCGA
IPTPTMT
DEG_SCF_FBW7_1
0.6507
p.M2456I
DO2551
BRCA
ICGC
IPTPTMT
DEG_SCF_FBW7_1
0.6507
p.T2457S
DO49439
PACA
ICGC
IPTPTMT
DEG_SCF_FBW7_1
0.6005
p.T2453I
SIDM00454
Rhabdomyosarcoma
GDSC
IPTPTMT
DEG_SCF_FBW7_1
0.8189
p.T2453I
ACH-000689
Sarcoma
CCLE
IPTPTMT
DEG_SCF_FBW7_1
0.8189
p.T2453I
RH-18
soft_tissue
COSMIC
IPTPTMT
DEG_SCF_FBW7_1
0.8189
p.P2461S
SIDM00177
Melanoma
GDSC
IPTPTMT
DEG_SCF_FBW7_1
0.2222
p.P2461S
ACH-002338
Skin Cancer
CCLE
IPTPTMT
DEG_SCF_FBW7_1
0.2222
p.P2461S
ACH-002510
Skin Cancer
CCLE
IPTPTMT
DEG_SCF_FBW7_1
0.2222
p.L2458V
SIDM00271
Gastric Carcinoma
GDSC
IPTPTMT
DEG_SCF_FBW7_1
0.3056
p.L2458V
ACH-000351
Gastric Cancer
CCLE
IPTPTMT
DEG_SCF_FBW7_1
0.3056
p.L2458V
MKN1
stomach
COSMIC
IPTPTMT
DEG_SCF_FBW7_1
0.3056
Drug responses associated with PDZD2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPTPTMT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O15018
PDZ domain-containing protein 2
DEG_SCF_FBW7_1
2451:2457
IPTPTMT
FBXW7
0.987
More...