DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IPVASVTPT
Uniprot ID:
Q9Y520
Source protein:
Protein PRRC2C
Source gene:
PRRC2C
Class:
DEG_SIAH_1
Location:
2304:2312
E3 ligase:
SIAH1,SIAH2,SIAH3
DEGRON score:
0.9944
ASA_SCORE:
87.1
COIL:
0.9537
CONS_SCORE:
0.5319
DSS_SCORE:
0.4048
HELIX:
0.0148
FCONS_SCORE:
1.0417
RIG_SCORE:
0.7288
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.T2312A
TCGA-78-7539
LUAD
TCGA
IPVASVTPT
DEG_SIAH_1
0.6028
p.P2305L
TCGA-A5-A0G2
UCEC
TCGA
IPVASVTPT
DEG_SIAH_1
0.7582
p.S2295L
TCGA-B5-A0JY
UCEC
TCGA
IPVASVTPT
DEG_SIAH_1
0.0833
p.S2295L
TCGA-EE-A2M5
SKCM
TCGA
IPVASVTPT
DEG_SIAH_1
0.0833
p.S2295L
TCGA-EE-A2MC
SKCM
TCGA
IPVASVTPT
DEG_SIAH_1
0.0833
p.G2319C
TCGA-D3-A3CE
SKCM
TCGA
IPVASVTPT
DEG_SIAH_1
0.1389
p.G2319C
TCGA-FS-A1ZN
SKCM
TCGA
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO233270
GACA
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO222423
MELA
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO222843
MELA
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO37559
SKCM
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO37425
SKCM
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.S2297L
DO43041
UCEC
ICGC
IPVASVTPT
DEG_SIAH_1
0.1389
p.A2309S
DO229035
LICA
ICGC
IPVASVTPT
DEG_SIAH_1
0.7588
p.A2320T
DO48719
LIRI
ICGC
IPVASVTPT
DEG_SIAH_1
0.1111
p.G2321C
DO37405
SKCM
ICGC
IPVASVTPT
DEG_SIAH_1
0.5278
p.G2321C
DO38165
SKCM
ICGC
IPVASVTPT
DEG_SIAH_1
0.5278
p.P2307L
DO41235
UCEC
ICGC
IPVASVTPT
DEG_SIAH_1
0.7582
Drug responses associated with PRRC2C mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPVASVTPT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y520
Protein PRRC2C
DEG_SIAH_1
2304:2312
IPVASVTPT
SIAH1,SIAH2,SIAH3
0.9944
More...