DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
IPVYWE
Uniprot ID:
Q9BUB7
Source protein:
Transmembrane protein 70, mitochondrial
Source gene:
TMEM70
Class:
LIG_APCC_ABBA_1
Location:
71:76
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5919
ASA_SCORE:
77.1667
COIL:
0.6342
CONS_SCORE:
0.3074
DSS_SCORE:
0.1899
HELIX:
0.0627
FCONS_SCORE:
1.0008
RIG_SCORE:
0.8689
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P72H
TCGA-D3-A2JP
SKCM
TCGA
IPVYWE
LIG_APCC_ABBA_1
0.6583
p.P72H
DO47407
SKCM
ICGC
IPVYWE
LIG_APCC_ABBA_1
0.6583
p.P85Q
DO222755
COCA
ICGC
IPVYWE
LIG_APCC_ABBA_1
0.0833
p.L62I
DO233888
GACA
ICGC
IPVYWE
LIG_APCC_ABBA_1
0.0833
p.R65L
DO229034
LICA
ICGC
IPVYWE
LIG_APCC_ABBA_1
0.1667
p.R80Q
DO222749
MELA
ICGC
IPVYWE
LIG_APCC_ABBA_1
0.2222
p.Y78C
SIDM00362
Burkitt's Lymphoma
GDSC
IPVYWE
LIG_APCC_ABBA_1
0.2778
p.Y78C
ACH-002293
Lymphoma
CCLE
IPVYWE
LIG_APCC_ABBA_1
0.2778
p.Y78C
P32-ISH
haematopoietic_and_lymphoid_tissue
COSMIC
IPVYWE
LIG_APCC_ABBA_1
0.2778
p.R68P
ACH-000862
Bladder Cancer
CCLE
IPVYWE
LIG_APCC_ABBA_1
0.25
Drug responses associated with TMEM70 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IPVYWE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BUB7
Transmembrane protein 70, mitochondrial
LIG_APCC_ABBA_1
71:76
IPVYWE
APC,CDC20,FZR1
0.5919
More...