DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
IQGPRGSPGR
Uniprot ID:
P53420
Source protein:
Collagen alpha-4
Source gene:
COL4A4
Class:
SCF_FBXL2
Location:
1110:1119
E3 ligase:
FBXL2
DEGRON score:
0.8096
ASA_SCORE:
82.89
COIL:
0.9481
CONS_SCORE:
0.4414
DSS_SCORE:
0.9127
HELIX:
0.0104
FCONS_SCORE:
0.7824
RIG_SCORE:
0.4801
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G1127E
TCGA-B5-A0K9
UCEC
TCGA
IQGPRGSPGR
SCF_FBXL2
0.1111
p.G1127E
DO42097
UCEC
ICGC
IQGPRGSPGR
SCF_FBXL2
0.1111
p.P1117H
TCGA-BS-A0U8
UCEC
TCGA
IQGPRGSPGR
SCF_FBXL2
0.6583
p.P1117H
DO228974
LICA
ICGC
IQGPRGSPGR
SCF_FBXL2
0.6583
p.P1117H
DO41380
UCEC
ICGC
IQGPRGSPGR
SCF_FBXL2
0.6583
p.G1112W
TCGA-CV-6936
HNSC
TCGA
IQGPRGSPGR
SCF_FBXL2
0.6714
p.G1112W
DO14210
HNSC
ICGC
IQGPRGSPGR
SCF_FBXL2
0.6714
p.R1114I
TCGA-ER-A19P
SKCM
TCGA
IQGPRGSPGR
SCF_FBXL2
0.8102
p.R1114I
DO47623
SKCM
ICGC
IQGPRGSPGR
SCF_FBXL2
0.8102
p.S1125F
TCGA-FW-A3R5
SKCM
TCGA
IQGPRGSPGR
SCF_FBXL2
0.1667
p.S1125F
DO37406
SKCM
ICGC
IQGPRGSPGR
SCF_FBXL2
0.1667
p.P1123L
TCGA-GN-A266
SKCM
TCGA
IQGPRGSPGR
SCF_FBXL2
0.2222
p.P1123L
DO37432
SKCM
ICGC
IQGPRGSPGR
SCF_FBXL2
0.2222
p.G1121R
TCGA-W3-A825
SKCM
TCGA
IQGPRGSPGR
SCF_FBXL2
0.2778
p.G1121R
DO51272
SKCM
ICGC
IQGPRGSPGR
SCF_FBXL2
0.2778
p.G1103R
DO221192
AML
ICGC
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
SIDM00447
B-Lymphoblastic Leukemia
GDSC
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
SIDM00151
Ovarian Carcinoma
GDSC
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
ACH-000960
Leukemia
CCLE
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
ACH-000966
Ovarian Cancer
CCLE
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
IGROV-1
ovary
COSMIC
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1103R
REH
haematopoietic_and_lymphoid_tissue
COSMIC
IQGPRGSPGR
SCF_FBXL2
0.1389
p.G1118R
DO23236
LINC
ICGC
IQGPRGSPGR
SCF_FBXL2
0.6457
p.P1117S
DO23202
LINC
ICGC
IQGPRGSPGR
SCF_FBXL2
0.5641
p.P1117S
SIDM00140
Melanoma
GDSC
IQGPRGSPGR
SCF_FBXL2
0.5641
p.P1117S
ACH-000968
Skin Cancer
CCLE
IQGPRGSPGR
SCF_FBXL2
0.5641
p.P1117S
COLO-792
skin
COSMIC
IQGPRGSPGR
SCF_FBXL2
0.5641
p.G1118E
DO222875
MELA
ICGC
IQGPRGSPGR
SCF_FBXL2
0.6087
p.G1106C
DO229275
THCA
ICGC
IQGPRGSPGR
SCF_FBXL2
0.2222
p.G1121V
DO229242
THCA
ICGC
IQGPRGSPGR
SCF_FBXL2
0.2778
p.G1115R
SIDM00149
Melanoma
GDSC
IQGPRGSPGR
SCF_FBXL2
0.7568
p.G1115R
ACH-000750
Skin Cancer
CCLE
IQGPRGSPGR
SCF_FBXL2
0.7568
p.G1115R
LOXIMVI
skin
COSMIC
IQGPRGSPGR
SCF_FBXL2
0.7568
p.L1107F
SIDM00711
Squamous Cell Lung Carcinoma
GDSC
IQGPRGSPGR
SCF_FBXL2
0.25
p.L1107F
ACH-000727
Lung Cancer
CCLE
IQGPRGSPGR
SCF_FBXL2
0.25
p.L1107F
NCI-H2066
lung
COSMIC
IQGPRGSPGR
SCF_FBXL2
0.25
Drug responses associated with COL4A4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IQGPRGSPGR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P53420
Collagen alpha-4
SCF_FBXL2
1110:1119
IQGPRGSPGR
FBXL2
0.8096
More...