DegronMD: protein-targeted degradation, mutation and drug response to degrons
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CGC
Degron:
IQPSRGVR
Uniprot ID:
O75306
Source protein:
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
Source gene:
NDUFS2
Class:
SCF_FBXL2
Location:
28:35
E3 ligase:
FBXL2
DEGRON score:
0.9508
ASA_SCORE:
80.925
COIL:
0.8791
CONS_SCORE:
0.2632
DSS_SCORE:
0.3714
HELIX:
0.0393
FCONS_SCORE:
0.9863
RIG_SCORE:
0.7413
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R35W
TCGA-AN-A046
BRCA
TCGA
IQPSRGVR
SCF_FBXL2
0.8634
p.R35W
DO1285
BRCA
ICGC
IQPSRGVR
SCF_FBXL2
0.8634
p.G21A
TCGA-CR-6472
HNSC
TCGA
IQPSRGVR
SCF_FBXL2
0.1389
p.G21A
DO15870
HNSC
ICGC
IQPSRGVR
SCF_FBXL2
0.1389
p.R35Q
TCGA-CV-A6K1
HNSC
TCGA
IQPSRGVR
SCF_FBXL2
0.7329
p.R35Q
DO52078
HNSC
ICGC
IQPSRGVR
SCF_FBXL2
0.7329
p.R35Q
SIDM01018
Hodgkin's Lymphoma
GDSC
IQPSRGVR
SCF_FBXL2
0.7329
p.R35Q
ACH-000815
Lymphoma
CCLE
IQPSRGVR
SCF_FBXL2
0.7329
p.R35Q
KM-H2
haematopoietic_and_lymphoid_tissue
COSMIC
IQPSRGVR
SCF_FBXL2
0.7329
p.Q36H
TCGA-PK-A5HB
ACC
TCGA
IQPSRGVR
SCF_FBXL2
0.3056
p.D40H
TCGA-XF-AAMG
BLCA
TCGA
IQPSRGVR
SCF_FBXL2
0.1944
p.D40H
DO219049
BLCA
ICGC
IQPSRGVR
SCF_FBXL2
0.1944
p.R19W
DO229010
COCA
ICGC
IQPSRGVR
SCF_FBXL2
0.0833
p.P20T
DO229005
COCA
ICGC
IQPSRGVR
SCF_FBXL2
0.1111
p.P20T
DO230659
LAML
ICGC
IQPSRGVR
SCF_FBXL2
0.1111
p.P20T
DO229047
LICA
ICGC
IQPSRGVR
SCF_FBXL2
0.1111
p.P20T
DO231124
LUSC
ICGC
IQPSRGVR
SCF_FBXL2
0.1111
p.Q38H
DO228971
LICA
ICGC
IQPSRGVR
SCF_FBXL2
0.25
p.L18M
DO229227
THCA
ICGC
IQPSRGVR
SCF_FBXL2
0.0556
Drug responses associated with NDUFS2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IQPSRGVR
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75306
NADH dehydrogenase [ubiquinone] iron-sulfur protein 2, mitochondrial
SCF_FBXL2
28:35
IQPSRGVR
FBXL2
0.9508
More...