DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IQPYPD
Uniprot ID:
Q14112
Source protein:
Nidogen-2
Source gene:
NID2
Class:
LIG_APCC_ABBA_1
Location:
420:425
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9924
ASA_SCORE:
80.75
COIL:
0.854
CONS_SCORE:
0.2691
DSS_SCORE:
0.7459
HELIX:
0.0248
FCONS_SCORE:
1.0646
RIG_SCORE:
0.5645
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P422H
TCGA-66-2787
LUSC
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.7694
p.E416K
TCGA-AX-A0J0
UCEC
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
TCGA-EI-6917
READ
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
TCGA-EO-A22X
UCEC
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
DO36881
READ
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
DO43907
UCEC
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
DO41133
UCEC
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
SIDM01768
Melanoma
GDSC
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.E416K
ACH-000899
Skin Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.P422T
TCGA-CV-6933
HNSC
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.7031
p.P422T
DO14164
HNSC
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.7031
p.P430S
TCGA-D3-A2JF
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.G418E
TCGA-D3-A51T
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.2778
p.G426V
TCGA-DA-A1IB
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.P415L
TCGA-EE-A29D
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.P415L
DO38123
SKCM
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.P424S
TCGA-EE-A2M5
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.5641
p.P424S
DO222423
MELA
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.5641
p.P424S
DO37425
SKCM
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.5641
p.N417K
TCGA-FD-A3SS
BLCA
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.25
p.N417K
DO737
BLCA
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.25
p.S431L
TCGA-FW-A3R5
SKCM
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.1667
p.S431L
ACH-001973
Metastasis
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.1667
p.G426A
TCGA-L9-A7SV
LUAD
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.T410I
TCGA-QM-A5NM
UCS
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.0556
p.N417S
TCGA-QU-A6IM
PRAD
TCGA
IQPYPD
LIG_APCC_ABBA_1
0.25
p.N417S
DO49852
PRAD
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.25
p.T426M
DO50403
ESAD
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.T426M
DO41235
UCEC
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.Y410H
DO14662
HNSC
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.0556
p.Y427C
DO45093
LIRI
ICGC
IQPYPD
LIG_APCC_ABBA_1
0.2778
p.P415T
SIDM00730
Small Cell Lung Carcinoma
GDSC
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.P415T
ACH-000610
Lung Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.P415T
NCI-H2227
lung
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.1944
p.D425N
SIDM00006
Other Solid Cancers
GDSC
IQPYPD
LIG_APCC_ABBA_1
0.6932
p.D425N
ACH-001552
Skin Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.6932
p.D425N
MCC26
skin
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.6932
p.P424T
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
IQPYPD
LIG_APCC_ABBA_1
0.5919
p.P424T
ACH-000888
Lung Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.5919
p.P424T
NCI-H1793
lung
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.5919
p.S419N
SIDM01518
Oral Cavity Carcinoma
GDSC
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.S419N
ACH-000771
Head and Neck Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.3056
p.E416V
ACH-002508
Skin Cancer
CCLE
IQPYPD
LIG_APCC_ABBA_1
0.2222
p.D431N
NCI-H378
lung
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.1667
p.R424W
JHU-011
upper_aerodigestive_tract
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.8634
p.S425R
H513
pleura
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.7427
p.P416R
CML-T1
haematopoietic_and_lymphoid_tissue
COSMIC
IQPYPD
LIG_APCC_ABBA_1
0.2222
Drug responses associated with NID2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IQPYPD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q14112
Nidogen-2
LIG_APCC_ABBA_1
420:425
IQPYPD
APC,CDC20,FZR1
0.9924
More...