DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
IRIHQD
Uniprot ID:
Q8TCU5
Source protein:
Glutamate receptor ionotropic, NMDA 3A
Source gene:
GRIN3A
Class:
LIG_APCC_ABBA_1
Location:
1040:1045
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9351
ASA_SCORE:
106.6167
COIL:
0.7658
CONS_SCORE:
0.3969
DSS_SCORE:
0.5804
HELIX:
0.0912
FCONS_SCORE:
0.8372
RIG_SCORE:
0.7745
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.D1045N
TCGA-91-6829
LUAD
TCGA
IRIHQD
LIG_APCC_ABBA_1
0.6932
p.D1045N
DO23564
LUAD
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6932
p.S1030T
TCGA-CD-8529
STAD
TCGA
IRIHQD
LIG_APCC_ABBA_1
0.0556
p.S1030T
DO47753
STAD
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.0556
p.E1032D
TCGA-CM-4743
COAD
TCGA
IRIHQD
LIG_APCC_ABBA_1
0.1111
p.E1032D
DO8103
COAD
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.1111
p.P1050L
TCGA-F7-A624
HNSC
TCGA
IRIHQD
LIG_APCC_ABBA_1
0.1944
p.P1050L
DO44440
HNSC
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.1944
p.P1047S
DO1083
BRCA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.2778
p.R1041Q
DO230334
COCA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO229010
COCA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO229013
COCA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO229003
COCA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO229505
LAML
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO230659
LAML
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO231140
LAML
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO228941
LICA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO228947
LICA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO229047
LICA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.R1041Q
DO231155
LUSC
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.6218
p.L1048F
DO220886
MELA
ICGC
IRIHQD
LIG_APCC_ABBA_1
0.25
p.E1033K
SIDM00057
Neuroblastoma
GDSC
IRIHQD
LIG_APCC_ABBA_1
0.1389
p.E1033K
ACH-000676
Brain Cancer
CCLE
IRIHQD
LIG_APCC_ABBA_1
0.1389
p.E1033K
ACH-002389
Neuroblastoma
CCLE
IRIHQD
LIG_APCC_ABBA_1
0.1389
p.E1033K
ACN
autonomic_ganglia
COSMIC
IRIHQD
LIG_APCC_ABBA_1
0.1389
p.G1034R
ACH-000465
Skin Cancer
CCLE
IRIHQD
LIG_APCC_ABBA_1
0.1667
p.G1034R
SK-MEL-1
skin
COSMIC
IRIHQD
LIG_APCC_ABBA_1
0.1667
Drug responses associated with GRIN3A mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRIHQD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8TCU5
Glutamate receptor ionotropic, NMDA 3A
LIG_APCC_ABBA_1
1040:1045
IRIHQD
APC,CDC20,FZR1
0.9351
More...