DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IRKFLGGVG
Uniprot ID:
Q8IY85
Source protein:
EF-hand calcium-binding domain-containing protein 13
Source gene:
EFCAB13
Class:
DEG_APCC_DBOX_1
Location:
366:374
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6656
ASA_SCORE:
63.4778
COIL:
0.5543
CONS_SCORE:
0.5878
DSS_SCORE:
0.3986
HELIX:
0.1652
FCONS_SCORE:
0.9231
RIG_SCORE:
0.7617
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.Y384C
TCGA-CK-5913
COAD
TCGA
IRKFLGGVG
DEG_APCC_DBOX_1
0.5
p.K361E
TCGA-D9-A6EA
SKCM
TCGA
IRKFLGGVG
DEG_APCC_DBOX_1
0.3056
p.K361Q
TCGA-D9-A6EC
SKCM
TCGA
IRKFLGGVG
DEG_APCC_DBOX_1
0.3056
p.F369C
TCGA-DK-A6AW
BLCA
TCGA
IRKFLGGVG
DEG_APCC_DBOX_1
0.5996
p.F369C
TCGA-ND-A4WC
UCS
TCGA
IRKFLGGVG
DEG_APCC_DBOX_1
0.5996
p.T356S
DO3852
BRCA
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.0556
p.A357G
DO234371
ESAD
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.0833
p.L371F
DO233792
GACA
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.6981
p.L381R
DO233926
GACA
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.1389
p.E366K
DO220909
MELA
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.7022
p.L361M
DO37511
SKCM
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.3056
p.F364L
DO47769
STAD
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.2778
p.F364V
DO43907
UCEC
ICGC
IRKFLGGVG
DEG_APCC_DBOX_1
0.2778
p.N377K
SIDM01003
T-Lymphoblastic Leukemia
GDSC
IRKFLGGVG
DEG_APCC_DBOX_1
0.25
p.N377K
KE-37
haematopoietic_and_lymphoid_tissue
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.25
p.K368Q
SIDM00534
Colorectal Carcinoma
GDSC
IRKFLGGVG
DEG_APCC_DBOX_1
0.5833
p.K368Q
ACH-000986
Colon/Colorectal Cancer
CCLE
IRKFLGGVG
DEG_APCC_DBOX_1
0.5833
p.K368Q
HT-115
large_intestine
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.5833
p.I358V
TUR
haematopoietic_and_lymphoid_tissue
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.2222
p.A357V
NB(TU)1-10
autonomic_ganglia
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.0833
p.A357V
MMAC-SF
skin
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.0833
p.L361V
COLO-792
skin
COSMIC
IRKFLGGVG
DEG_APCC_DBOX_1
0.3056
Drug responses associated with EFCAB13 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRKFLGGVG
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8IY85
EF-hand calcium-binding domain-containing protein 13
DEG_APCC_DBOX_1
366:374
IRKFLGGVG
APC,CDC20,FZR1
0.6656
More...