DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IRRPLDPLD
Uniprot ID:
Q9C0J1
Source protein:
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4
Source gene:
B3GNT4
Class:
DEG_APCC_DBOX_1
Location:
330:338
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7037
ASA_SCORE:
81.1111
COIL:
0.8849
CONS_SCORE:
0.3977
DSS_SCORE:
0.0471
HELIX:
0.0341
FCONS_SCORE:
0.805
RIG_SCORE:
0.8109
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.A323V
TCGA-55-7573
LUAD
TCGA
IRRPLDPLD
DEG_APCC_DBOX_1
0.1389
p.W335L
DO1071
BRCA
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7015
p.H324Y
DO5507
BRCA
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1667
p.R325H
DO7776
COAD
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1944
p.R325C
DO48682
LIRI
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1944
p.L329I
DO37695
SKCM
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.3056
p.E330K
DO37567
SKCM
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7022
p.E330K
DO47459
SKCM
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7022
p.E330K
DO47777
STAD
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7022
p.A336T
DO219773
UCEC
ICGC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7139
p.R331Q
SIDM00535
Chondrosarcoma
GDSC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7329
p.R331Q
SIDM00493
Other Solid Cancers
GDSC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7329
p.A323S
SIDM00255
Neuroblastoma
GDSC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1389
p.A323S
NB17
autonomic_ganglia
COSMIC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1389
p.F325L
SIDM00965
Small Cell Lung Carcinoma
GDSC
IRRPLDPLD
DEG_APCC_DBOX_1
0.1944
p.R332W
SIDM00881
Breast Carcinoma
GDSC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7523
p.R332W
HCC1428
breast
COSMIC
IRRPLDPLD
DEG_APCC_DBOX_1
0.7523
p.H324Q
ACH-001618
Leukemia
CCLE
IRRPLDPLD
DEG_APCC_DBOX_1
0.1667
p.C340R
CAL-62
thyroid
COSMIC
IRRPLDPLD
DEG_APCC_DBOX_1
0.2778
Drug responses associated with B3GNT4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRRPLDPLD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9C0J1
N-acetyllactosaminide beta-1,3-N-acetylglucosaminyltransferase 4
DEG_APCC_DBOX_1
330:338
IRRPLDPLD
APC,CDC20,FZR1
0.7037
More...