DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IRTPNAT
Uniprot ID:
Q16878
Source protein:
Cysteine dioxygenase type 1
Source gene:
CDO1
Class:
DEG_SCF_FBW7_1
Location:
187:193
E3 ligase:
FBXW7
DEGRON score:
0.9264
ASA_SCORE:
83.1571
COIL:
0.5666
CONS_SCORE:
0.3515
DSS_SCORE:
0.5326
HELIX:
0.0163
FCONS_SCORE:
0.8779
RIG_SCORE:
0.6948
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S196L
TCGA-A5-A0G2
UCEC
TCGA
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.S196L
DO41235
UCEC
ICGC
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.S196L
SIDM00118
Colorectal Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.S196L
ACH-001081
Colon/Colorectal Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.S196L
HCC2998
large_intestine
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.R188I
TCGA-AJ-A3EL
UCEC
TCGA
IRTPNAT
DEG_SCF_FBW7_1
0.6991
p.R188I
DO41542
UCEC
ICGC
IRTPNAT
DEG_SCF_FBW7_1
0.6991
p.S194L
TCGA-EY-A1GI
UCEC
TCGA
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
TCGA-F5-6814
READ
TCGA
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
DO36556
READ
ICGC
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
DO41211
UCEC
ICGC
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
SIDM00839
Colorectal Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
ACH-000950
Colon/Colorectal Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S194L
LoVo
large_intestine
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.75
p.S196A
DO1094
BRCA
ICGC
IRTPNAT
DEG_SCF_FBW7_1
0.25
p.G195R
SIDM00746
Non-Small Cell Lung Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.2778
p.G195R
ACH-000766
Lung Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.2778
p.G195R
NCI-H1648
lung
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.2778
p.T193A
SIDM00965
Small Cell Lung Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.825
p.T193A
ACH-000800
Lung Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.825
p.T193A
NCI-H446
lung
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.825
p.P190T
SIDM00498
Colorectal Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.7031
p.P190T
ACH-000970
Colon/Colorectal Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.7031
p.P190T
SNU-C5
large_intestine
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.7031
p.I187M
SIDM00485
Oral Cavity Carcinoma
GDSC
IRTPNAT
DEG_SCF_FBW7_1
0.6507
p.I187M
ACH-000794
Head and Neck Cancer
CCLE
IRTPNAT
DEG_SCF_FBW7_1
0.6507
p.I187M
BICR22
upper_aerodigestive_tract
COSMIC
IRTPNAT
DEG_SCF_FBW7_1
0.6507
Drug responses associated with CDO1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRTPNAT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q16878
Cysteine dioxygenase type 1
DEG_SCF_FBW7_1
187:193
IRTPNAT
FBXW7
0.9264
More...