DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
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CGC
Degron:
IRVALSNIS
Uniprot ID:
O75128
Source protein:
Protein cordon-bleu
Source gene:
COBL
Class:
DEG_APCC_DBOX_1
Location:
611:619
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6079
ASA_SCORE:
83.9333
COIL:
0.7089
CONS_SCORE:
0.3571
DSS_SCORE:
0.4256
HELIX:
0.0566
FCONS_SCORE:
1.0345
RIG_SCORE:
0.7581
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R612H
TCGA-85-8277
LUSC
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.8244
p.R612H
DO26719
LUSC
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.8244
p.A628T
TCGA-AX-A05Z
UCEC
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.0833
p.A628T
DO40884
UCEC
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.0833
p.A603T
TCGA-AX-A2HD
UCEC
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.1111
p.A603T
TCGA-BR-8487
STAD
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.1111
p.A603T
DO228353
MALY
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.1111
p.A603T
DO47867
STAD
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.1111
p.A603T
DO42608
UCEC
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.1111
p.R612C
TCGA-CS-6670
LGG
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.8301
p.R612C
DO22161
LGG
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.8301
p.G610E
TCGA-EE-A2M5
SKCM
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.3056
p.G610E
DO37425
SKCM
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.3056
p.G622E
TCGA-EE-A3AE
SKCM
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.25
p.G622E
DO37802
SKCM
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.25
p.A614T
TCGA-RP-A693
SKCM
TCGA
IRVALSNIS
DEG_APCC_DBOX_1
0.6028
p.A614T
DO51268
SKCM
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.6028
p.A628V
DO8730
COAD
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.0833
p.A628V
DO233865
GACA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.0833
p.V607I
DO229010
COCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO229013
COCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO229016
COCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO229003
COCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO229005
COCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO229489
LAML
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO228941
LICA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO230999
LUSC
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.V607I
DO52365
LUSC
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.2222
p.G608R
DO233210
GACA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.25
p.G608R
DO232761
PBCA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.25
p.A628E
DO229018
LICA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.0833
p.P629L
DO220851
MELA
ICGC
IRVALSNIS
DEG_APCC_DBOX_1
0.0556
p.N616S
SIDM00197
Ewing's Sarcoma
GDSC
IRVALSNIS
DEG_APCC_DBOX_1
0.7069
p.N616S
EW-18
bone
COSMIC
IRVALSNIS
DEG_APCC_DBOX_1
0.7069
p.I618S
ACH-000848
Liver Cancer
CCLE
IRVALSNIS
DEG_APCC_DBOX_1
0.7341
p.I618S
JHH-7
liver
COSMIC
IRVALSNIS
DEG_APCC_DBOX_1
0.7341
p.R612G
ACH-002396
Bone Cancer
CCLE
IRVALSNIS
DEG_APCC_DBOX_1
0.7568
p.R612G
Sarc9371
bone
COSMIC
IRVALSNIS
DEG_APCC_DBOX_1
0.7568
Drug responses associated with COBL mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IRVALSNIS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O75128
Protein cordon-bleu
DEG_APCC_DBOX_1
611:619
IRVALSNIS
APC,CDC20,FZR1
0.6079
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