DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISDTPLEE
Uniprot ID:
P78363
Source protein:
Retinal-specific phospholipid-transporting ATPase ABCA4
Source gene:
ABCA4
Class:
DEG_SCF_FBW7_2
Location:
1264:1271
E3 ligase:
FBXW7
DEGRON score:
0.7196
ASA_SCORE:
37.25
COIL:
0.3585
CONS_SCORE:
0.625
DSS_SCORE:
0.2148
HELIX:
0.3806
FCONS_SCORE:
1.419
RIG_SCORE:
0.7965
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E1278K
TCGA-21-1079
LUSC
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1278K
TCGA-CR-6481
HNSC
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1278K
TCGA-ER-A194
SKCM
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1278K
DO14990
HNSC
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1278K
DO26846
LUSC
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1278K
DO47646
SKCM
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1389
p.E1270D
TCGA-46-3769
LUSC
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.5647
p.E1270D
DO26590
LUSC
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.5647
p.T1277M
TCGA-AG-3591
READ
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1667
p.T1277M
DO222884
COCA
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1667
p.T1277M
DO37316
READ
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1667
p.L1259I
TCGA-AG-A002
READ
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1944
p.L1259I
SIDM00491
Thyroid Gland Carcinoma
GDSC
ISDTPLEE
DEG_SCF_FBW7_2
0.1944
p.L1259I
ACH-001443
Thyroid Cancer
CCLE
ISDTPLEE
DEG_SCF_FBW7_2
0.1944
p.L1259I
ASH-3
thyroid
COSMIC
ISDTPLEE
DEG_SCF_FBW7_2
0.1944
p.E1270K
TCGA-D3-A2JF
SKCM
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.591
p.E1270K
TCGA-ER-A19G
SKCM
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.591
p.E1270K
DO47284
SKCM
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.591
p.E1270K
DO38153
SKCM
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.591
p.P1268L
TCGA-EB-A41A
SKCM
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.7582
p.P1268L
DO220851
MELA
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.7582
p.P1268L
DO37429
SKCM
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.7582
p.D1279N
TCGA-GF-A6C9
SKCM
TCGA
ISDTPLEE
DEG_SCF_FBW7_2
0.1111
p.D1279N
DO51254
SKCM
ICGC
ISDTPLEE
DEG_SCF_FBW7_2
0.1111
Drug responses associated with ABCA4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISDTPLEE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P78363
Retinal-specific phospholipid-transporting ATPase ABCA4
DEG_SCF_FBW7_2
1264:1271
ISDTPLEE
FBXW7
0.7196
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