DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISLYAE
Uniprot ID:
P49754
Source protein:
Vacuolar protein sorting-associated protein 41 homolog
Source gene:
VPS41
Class:
LIG_APCC_ABBA_1
Location:
617:622
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9013
ASA_SCORE:
47.5667
COIL:
0.0688
CONS_SCORE:
0.5605
DSS_SCORE:
0.29
HELIX:
0.9172
FCONS_SCORE:
1.2786
RIG_SCORE:
0.8095
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R611H
TCGA-AX-A0J1
UCEC
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611H
DO27807
MALY
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611H
DO41199
UCEC
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611H
SIDM00646
Small Cell Lung Carcinoma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611H
SIDM00676
Bladder Carcinoma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.D624N
TCGA-BR-6709
STAD
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.2778
p.D624N
DO38356
STAD
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.2778
p.R611C
TCGA-BR-8680
STAD
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611C
TCGA-EO-A22R
UCEC
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611C
DO47769
STAD
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.R611C
DO42713
UCEC
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1667
p.Y623N
TCGA-BR-A4CS
STAD
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.3056
p.Y623N
DO47965
STAD
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.3056
p.P630S
TCGA-D3-A8GI
SKCM
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630S
DO50284
SKCM
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630L
TCGA-EE-A181
SKCM
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630L
DO37444
SKCM
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630L
SIDM00608
Plasma Cell Myeloma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630L
ACH-000714
Myeloma
CCLE
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.P630L
KMS-11
haematopoietic_and_lymphoid_tissue
COSMIC
ISLYAE
LIG_APCC_ABBA_1
0.1111
p.E614K
TCGA-VQ-A924
STAD
TCGA
ISLYAE
LIG_APCC_ABBA_1
0.25
p.E614K
DO51795
STAD
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.25
p.N627K
DO221547
PACA
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.1944
p.Y623H
DO221547
PACA
ICGC
ISLYAE
LIG_APCC_ABBA_1
0.3056
p.Y623H
SIDM02020
Esophageal Carcinoma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.3056
p.S618N
SIDM00781
Colorectal Carcinoma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.5958
p.S618N
SIDM00780
Colorectal Carcinoma
GDSC
ISLYAE
LIG_APCC_ABBA_1
0.5958
p.S618N
SNU-C2B
large_intestine
COSMIC
ISLYAE
LIG_APCC_ABBA_1
0.5958
p.I621V
NOS-1
bone
COSMIC
ISLYAE
LIG_APCC_ABBA_1
0.7076
p.I621V
KYSE-70
oesophagus
COSMIC
ISLYAE
LIG_APCC_ABBA_1
0.7076
Drug responses associated with VPS41 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISLYAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P49754
Vacuolar protein sorting-associated protein 41 homolog
LIG_APCC_ABBA_1
617:622
ISLYAE
APC,CDC20,FZR1
0.9013
More...