DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISPYKD
Uniprot ID:
Q9Y676
Source protein:
28S ribosomal protein S18b, mitochondrial
Source gene:
MRPS18B
Class:
LIG_APCC_ABBA_1
Location:
48:53
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9917
ASA_SCORE:
79.95
COIL:
0.854
CONS_SCORE:
0.4351
DSS_SCORE:
0.3707
HELIX:
0.087
FCONS_SCORE:
0.9032
RIG_SCORE:
0.7111
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S42Y
TCGA-AP-A056
UCEC
TCGA
ISPYKD
LIG_APCC_ABBA_1
0.6111
p.S42Y
DO43971
UCEC
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.6111
p.P50H
TCGA-AX-A2HD
UCEC
TCGA
ISPYKD
LIG_APCC_ABBA_1
0.7694
p.P50H
DO42608
UCEC
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.7694
p.E60K
TCGA-FD-A6TC
BLCA
TCGA
ISPYKD
LIG_APCC_ABBA_1
0.1389
p.E60K
TCGA-GM-A3NW
BRCA
TCGA
ISPYKD
LIG_APCC_ABBA_1
0.1389
p.E60K
DO49755
BLCA
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.1389
p.E60K
DO3001
BRCA
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.1389
p.S44F
TCGA-FI-A2D5
UCEC
TCGA
ISPYKD
LIG_APCC_ABBA_1
0.2222
p.S44F
DO41331
UCEC
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.2222
p.E39Q
DO223030
ESCA
ICGC
ISPYKD
LIG_APCC_ABBA_1
0.0833
p.P55L
SIDM01782
Oral Cavity Carcinoma
GDSC
ISPYKD
LIG_APCC_ABBA_1
0.2778
Drug responses associated with MRPS18B mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISPYKD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9Y676
28S ribosomal protein S18b, mitochondrial
LIG_APCC_ABBA_1
48:53
ISPYKD
APC,CDC20,FZR1
0.9917
More...