DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISTPLPS
Uniprot ID:
O60609
Source protein:
GDNF family receptor alpha-3
Source gene:
GFRA3
Class:
DEG_SCF_FBW7_1
Location:
71:77
E3 ligase:
FBXW7
DEGRON score:
0.6033
ASA_SCORE:
79.5571
COIL:
0.9053
CONS_SCORE:
0.6949
DSS_SCORE:
0.4307
HELIX:
0.0646
FCONS_SCORE:
0.9715
RIG_SCORE:
0.6167
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E78D
TCGA-B5-A3FC
UCEC
TCGA
ISTPLPS
DEG_SCF_FBW7_1
0.3056
p.E78D
DO41871
UCEC
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.3056
p.S81L
TCGA-EE-A3JA
SKCM
TCGA
ISTPLPS
DEG_SCF_FBW7_1
0.2222
p.S81L
DO47625
SKCM
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.2222
p.S81L
ACH-001991
Primary
CCLE
ISTPLPS
DEG_SCF_FBW7_1
0.2222
p.V82I
TCGA-EE-A3JE
SKCM
TCGA
ISTPLPS
DEG_SCF_FBW7_1
0.1944
p.V82I
DO48766
SKCM
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.1944
p.P83S
TCGA-FW-A3R5
SKCM
TCGA
ISTPLPS
DEG_SCF_FBW7_1
0.1667
p.P83S
DO37406
SKCM
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.1667
p.S70R
DO234300
ESAD
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.3056
p.S70R
DO229022
LICA
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.3056
p.P80T
DO228948
LICA
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.25
p.H63N
DO229015
LICA
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.1111
p.P74S
DO222413
MELA
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.6752
p.Y61D
DO46685
PACA
ICGC
ISTPLPS
DEG_SCF_FBW7_1
0.0556
p.T73I
SIDM01307
Colorectal Carcinoma
GDSC
ISTPLPS
DEG_SCF_FBW7_1
0.7078
p.P80S
SIDM01175
Other Sarcomas
GDSC
ISTPLPS
DEG_SCF_FBW7_1
0.25
p.P80S
ACH-002309
Sarcoma
CCLE
ISTPLPS
DEG_SCF_FBW7_1
0.25
p.P80S
SW684
soft_tissue
COSMIC
ISTPLPS
DEG_SCF_FBW7_1
0.25
Drug responses associated with GFRA3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISTPLPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
O60609
GDNF family receptor alpha-3
DEG_SCF_FBW7_1
71:77
ISTPLPS
FBXW7
0.6033
More...