DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISVHSE
Uniprot ID:
Q7Z6E9
Source protein:
E3 ubiquitin-protein ligase RBBP6
Source gene:
RBBP6
Class:
LIG_APCC_ABBA_1
Location:
418:423
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9639
ASA_SCORE:
99.45
COIL:
0.9367
CONS_SCORE:
0.3469
DSS_SCORE:
0.5126
HELIX:
0.0423
FCONS_SCORE:
1.1417
RIG_SCORE:
0.6984
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R430W
TCGA-44-8119
LUAD
TCGA
ISVHSE
LIG_APCC_ABBA_1
0.1389
p.R430W
TCGA-GN-A266
SKCM
TCGA
ISVHSE
LIG_APCC_ABBA_1
0.1389
p.R430W
DO24399
LUAD
ICGC
ISVHSE
LIG_APCC_ABBA_1
0.1389
p.R430W
DO37432
SKCM
ICGC
ISVHSE
LIG_APCC_ABBA_1
0.1389
p.V416L
DO229005
COCA
ICGC
ISVHSE
LIG_APCC_ABBA_1
0.2778
p.V416L
DO35100
PACA
ICGC
ISVHSE
LIG_APCC_ABBA_1
0.2778
p.V409G
SIDM00434
Plasma Cell Myeloma
GDSC
ISVHSE
LIG_APCC_ABBA_1
0.0833
p.V409G
ACH-000745
Myeloma
CCLE
ISVHSE
LIG_APCC_ABBA_1
0.0833
p.V409G
MOLP-8
haematopoietic_and_lymphoid_tissue
COSMIC
ISVHSE
LIG_APCC_ABBA_1
0.0833
p.P428R
SIDM00853
Other Sarcomas
GDSC
ISVHSE
LIG_APCC_ABBA_1
0.1944
p.P428R
ACH-000835
Sarcoma
CCLE
ISVHSE
LIG_APCC_ABBA_1
0.1944
p.P428R
GCT
soft_tissue
COSMIC
ISVHSE
LIG_APCC_ABBA_1
0.1944
p.V416A
ACH-001610
Brain Cancer
CCLE
ISVHSE
LIG_APCC_ABBA_1
0.2778
Drug responses associated with RBBP6 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISVHSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q7Z6E9
E3 ubiquitin-protein ligase RBBP6
LIG_APCC_ABBA_1
418:423
ISVHSE
APC,CDC20,FZR1
0.9639
More...