DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ISVYSE
Uniprot ID:
P36578
Source protein:
60S ribosomal protein L4
Source gene:
RPL4
Class:
LIG_APCC_ABBA_1
Location:
8:13
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.8195
ASA_SCORE:
42.6667
COIL:
0.2657
CONS_SCORE:
0.4965
DSS_SCORE:
0.3581
HELIX:
0.0053
FCONS_SCORE:
1.1449
RIG_SCORE:
0.7672
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E13K
TCGA-AA-3715
COAD
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.7022
p.E13K
DO8018
COAD
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.7022
p.S18F
TCGA-BR-A4J9
STAD
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.1944
p.S18F
DO38735
STAD
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.1944
p.A2V
TCGA-CF-A47W
BLCA
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.6111
p.A2V
DO44056
BLCA
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.6111
p.P6S
TCGA-CR-6467
HNSC
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.P6S
DO14942
HNSC
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.P6Q
TCGA-D9-A1X3
SKCM
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.P6Q
DO37456
SKCM
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.G15W
TCGA-EE-A2A5
SKCM
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.G15W
DO37941
SKCM
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.2778
p.S12F
TCGA-FW-A3R5
SKCM
TCGA
ISVYSE
LIG_APCC_ABBA_1
0.7982
p.S12F
DO37406
SKCM
ICGC
ISVYSE
LIG_APCC_ABBA_1
0.7982
Drug responses associated with RPL4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ISVYSE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P36578
60S ribosomal protein L4
LIG_APCC_ABBA_1
8:13
ISVYSE
APC,CDC20,FZR1
0.8195
More...