DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITLHPE
Uniprot ID:
A8MV65
Source protein:
Transcription cofactor vestigial-like protein 3
Source gene:
VGLL3
Class:
LIG_APCC_ABBA_1
Location:
114:119
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.6789
ASA_SCORE:
92.05
COIL:
0.8843
CONS_SCORE:
0.347
DSS_SCORE:
0.2866
HELIX:
0.079
FCONS_SCORE:
0.5921
RIG_SCORE:
0.7911
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G128A
TCGA-63-A5MG
LUSC
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.0833
p.G128A
DO52019
LUSC
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.0833
p.A113D
TCGA-86-8279
LUAD
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.3056
p.A113D
DO24140
LUAD
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.3056
p.L129I
TCGA-A6-3809
COAD
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.L129I
TCGA-DX-A6YS
SARC
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.L129I
DO8722
COAD
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.L129I
DO220005
SARC
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.E104G
TCGA-AX-A05Z
UCEC
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.E104G
DO40884
UCEC
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.0556
p.R108I
TCGA-EO-A3AY
UCEC
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.R108I
DO43202
UCEC
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.P118S
TCGA-RP-A695
SKCM
TCGA
ITLHPE
LIG_APCC_ABBA_1
0.5641
p.P118S
DO51270
SKCM
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.5641
p.Q112K
DO229029
LICA
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.2778
p.I122S
DO231127
LUSC
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.25
p.S123L
DO220873
MELA
ICGC
ITLHPE
LIG_APCC_ABBA_1
0.2222
p.S125N
SIDM00118
Colorectal Carcinoma
GDSC
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.S125N
ACH-001081
Colon/Colorectal Cancer
CCLE
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.S125N
HCC2998
large_intestine
COSMIC
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.R108T
SIDM00008
Ovarian Carcinoma
GDSC
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.R108T
ACH-000796
Ovarian Cancer
CCLE
ITLHPE
LIG_APCC_ABBA_1
0.1667
p.I114N
ACH-000786
Lymphoma
CCLE
ITLHPE
LIG_APCC_ABBA_1
0.728
p.I114N
OCI-AML5
haematopoietic_and_lymphoid_tissue
COSMIC
ITLHPE
LIG_APCC_ABBA_1
0.728
p.I114N
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
ITLHPE
LIG_APCC_ABBA_1
0.728
p.L116F
Daudi
haematopoietic_and_lymphoid_tissue
COSMIC
ITLHPE
LIG_APCC_ABBA_1
0.6981
Drug responses associated with VGLL3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITLHPE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
A8MV65
Transcription cofactor vestigial-like protein 3
LIG_APCC_ABBA_1
114:119
ITLHPE
APC,CDC20,FZR1
0.6789
More...