DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPEFS
Uniprot ID:
Q5VTB9
Source protein:
E3 ubiquitin-protein ligase RNF220
Source gene:
RNF220
Class:
DEG_SCF_FBW7_1
Location:
445:450
E3 ligase:
FBXW7
DEGRON score:
0.99
ASA_SCORE:
72.9667
COIL:
0.638
CONS_SCORE:
0.3414
DSS_SCORE:
0.6468
HELIX:
0.262
FCONS_SCORE:
1.0662
RIG_SCORE:
0.7154
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P440H
TCGA-66-2789
LUSC
TCGA
ITPEFS
DEG_SCF_FBW7_1
0.1944
p.P440H
DO27279
LUSC
ICGC
ITPEFS
DEG_SCF_FBW7_1
0.1944
p.D455N
TCGA-AC-A23H
BRCA
TCGA
ITPEFS
DEG_SCF_FBW7_1
0.1944
p.D455N
DO2401
BRCA
ICGC
ITPEFS
DEG_SCF_FBW7_1
0.1944
p.W452C
TCGA-D3-A3CE
SKCM
TCGA
ITPEFS
DEG_SCF_FBW7_1
0.2778
p.W452C
DO37405
SKCM
ICGC
ITPEFS
DEG_SCF_FBW7_1
0.2778
p.R444C
SIDM00214
Colorectal Carcinoma
GDSC
ITPEFS
DEG_SCF_FBW7_1
0.3056
p.R444C
ACH-000955
Colon/Colorectal Cancer
CCLE
ITPEFS
DEG_SCF_FBW7_1
0.3056
p.R444C
SNU-407
large_intestine
COSMIC
ITPEFS
DEG_SCF_FBW7_1
0.3056
Drug responses associated with RNF220 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPEFS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5VTB9
E3 ubiquitin-protein ligase RNF220
DEG_SCF_FBW7_1
445:450
ITPEFS
FBXW7
0.99
More...