DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPLNS
Uniprot ID:
Q17RY0
Source protein:
Cytoplasmic polyadenylation element-binding protein 4
Source gene:
CPEB4
Class:
DEG_SCF_FBW7_1
Location:
325:330
E3 ligase:
FBXW7
DEGRON score:
0.9995
ASA_SCORE:
68.4
COIL:
0.8728
CONS_SCORE:
0.4276
DSS_SCORE:
0.4783
HELIX:
0.0707
FCONS_SCORE:
1.1865
RIG_SCORE:
0.7348
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.L321P
TCGA-AA-3854
COAD
TCGA
ITPLNS
DEG_SCF_FBW7_1
0.2222
p.L321P
DO10148
COAD
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.2222
p.L321P
DO223068
ESCA
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.2222
p.K335N
TCGA-D1-A103
UCEC
TCGA
ITPLNS
DEG_SCF_FBW7_1
0.3056
p.K335N
DO42312
UCEC
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.3056
p.G320W
TCGA-EO-A22R
UCEC
TCGA
ITPLNS
DEG_SCF_FBW7_1
0.1944
p.G320W
DO42713
UCEC
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.1944
p.R318H
TCGA-FI-A2D5
UCEC
TCGA
ITPLNS
DEG_SCF_FBW7_1
0.1389
p.R318H
DO41331
UCEC
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.1389
p.S332L
TCGA-IR-A3LA
CESC
TCGA
ITPLNS
DEG_SCF_FBW7_1
0.7222
p.S332L
DO44377
CESC
ICGC
ITPLNS
DEG_SCF_FBW7_1
0.7222
p.R319K
SIDM00465
Ovarian Carcinoma
GDSC
ITPLNS
DEG_SCF_FBW7_1
0.1667
p.R319K
ACH-002183
Ovarian Cancer
CCLE
ITPLNS
DEG_SCF_FBW7_1
0.1667
p.R319K
OVMIU
ovary
COSMIC
ITPLNS
DEG_SCF_FBW7_1
0.1667
p.A339G
ACH-000436
Myeloma
CCLE
ITPLNS
DEG_SCF_FBW7_1
0.0833
p.R320H
RL95-2
endometrium
COSMIC
ITPLNS
DEG_SCF_FBW7_1
0.1944
p.R337H
RL95-2
endometrium
COSMIC
ITPLNS
DEG_SCF_FBW7_1
0.1389
Drug responses associated with CPEB4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPLNS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q17RY0
Cytoplasmic polyadenylation element-binding protein 4
DEG_SCF_FBW7_1
325:330
ITPLNS
FBXW7
0.9995
More...