DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPNVT
Uniprot ID:
Q96QE5
Source protein:
Transcription elongation factor, mitochondrial
Source gene:
TEFM
Class:
DEG_SCF_FBW7_1
Location:
43:48
E3 ligase:
FBXW7
DEGRON score:
0.7394
ASA_SCORE:
85.9667
COIL:
0.8078
CONS_SCORE:
0.2541
DSS_SCORE:
0.381
HELIX:
0.0298
FCONS_SCORE:
0.8575
RIG_SCORE:
0.79
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.R34W
TCGA-BS-A0UV
UCEC
TCGA
ITPNVT
DEG_SCF_FBW7_1
0.0833
p.R34W
DO42793
UCEC
ICGC
ITPNVT
DEG_SCF_FBW7_1
0.0833
p.R34W
SIDM01510
Non-Small Cell Lung Carcinoma
GDSC
ITPNVT
DEG_SCF_FBW7_1
0.0833
p.D51A
TCGA-D7-A4Z0
STAD
TCGA
ITPNVT
DEG_SCF_FBW7_1
0.25
p.D51A
DO47765
STAD
ICGC
ITPNVT
DEG_SCF_FBW7_1
0.25
p.P45H
SIDM00217
Colorectal Carcinoma
GDSC
ITPNVT
DEG_SCF_FBW7_1
0.7694
p.P45H
ACH-000999
Colon/Colorectal Cancer
CCLE
ITPNVT
DEG_SCF_FBW7_1
0.7694
p.P45H
SNU-1040
large_intestine
COSMIC
ITPNVT
DEG_SCF_FBW7_1
0.7694
p.C50F
SIDM01611
Endometrial Carcinoma
GDSC
ITPNVT
DEG_SCF_FBW7_1
0.2778
p.C50F
ACH-000996
Endometrial/Uterine Cancer
CCLE
ITPNVT
DEG_SCF_FBW7_1
0.2778
Drug responses associated with TEFM mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPNVT
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q96QE5
Transcription elongation factor, mitochondrial
DEG_SCF_FBW7_1
43:48
ITPNVT
FBXW7
0.7394
More...