DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPPPS
Uniprot ID:
Q8WVB6
Source protein:
Chromosome transmission fidelity protein 18 homolog
Source gene:
CHTF18
Class:
DEG_SCF_FBW7_1
Location:
130:135
E3 ligase:
FBXW7
DEGRON score:
0.9963
ASA_SCORE:
65
COIL:
0.9645
CONS_SCORE:
0.255
DSS_SCORE:
0.8332
HELIX:
0.0137
FCONS_SCORE:
1.1881
RIG_SCORE:
0.5736
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.S125C
TCGA-19-2620
GBM
TCGA
ITPPPS
DEG_SCF_FBW7_1
0.1944
p.L139I
TCGA-AA-3947
COAD
TCGA
ITPPPS
DEG_SCF_FBW7_1
0.2222
p.P133L
TCGA-AJ-A8CT
UCEC
TCGA
ITPPPS
DEG_SCF_FBW7_1
0.6471
p.E141D
TCGA-DX-A6YV
SARC
TCGA
ITPPPS
DEG_SCF_FBW7_1
0.1667
p.V135F
DO44465
KIRP
ICGC
ITPPPS
DEG_SCF_FBW7_1
0.7068
p.R139K
DO222731
MELA
ICGC
ITPPPS
DEG_SCF_FBW7_1
0.2222
p.R139K
DO37750
SKCM
ICGC
ITPPPS
DEG_SCF_FBW7_1
0.2222
p.E144G
DO233298
NACA
ICGC
ITPPPS
DEG_SCF_FBW7_1
0.0833
p.Q130P
DO218900
SKCA
ICGC
ITPPPS
DEG_SCF_FBW7_1
0.7035
p.S125F
SIDM00011
Melanoma
GDSC
ITPPPS
DEG_SCF_FBW7_1
0.1944
Drug responses associated with CHTF18 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPPPS
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8WVB6
Chromosome transmission fidelity protein 18 homolog
DEG_SCF_FBW7_1
130:135
ITPPPS
FBXW7
0.9963
More...