DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPVST
Uniprot ID:
Q99569
Source protein:
Plakophilin-4
Source gene:
PKP4
Class:
DEG_SCF_FBW7_1
Location:
1012:1017
E3 ligase:
FBXW7
DEGRON score:
0.9988
ASA_SCORE:
54.5167
COIL:
0.7103
CONS_SCORE:
0.3617
DSS_SCORE:
0.3839
HELIX:
0.14
FCONS_SCORE:
0.8969
RIG_SCORE:
0.8075
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.H1010R
TCGA-ZB-A96H
THYM
TCGA
ITPVST
DEG_SCF_FBW7_1
0.2778
p.L1018F
DO229028
LICA
ICGC
ITPVST
DEG_SCF_FBW7_1
0.3056
p.D1004Y
SIDM01150
Non-Small Cell Lung Carcinoma
GDSC
ITPVST
DEG_SCF_FBW7_1
0.1111
p.D1004Y
NCI-H838
lung
COSMIC
ITPVST
DEG_SCF_FBW7_1
0.1111
p.P1027T
SIDM00167
Head and Neck Carcinoma
GDSC
ITPVST
DEG_SCF_FBW7_1
0.0556
p.P1027T
ACH-000715
Head and Neck Cancer
CCLE
ITPVST
DEG_SCF_FBW7_1
0.0556
p.D1002Y
NCI-H838
lung
COSMIC
ITPVST
DEG_SCF_FBW7_1
0.1667
Drug responses associated with PKP4 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPVST
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q99569
Plakophilin-4
DEG_SCF_FBW7_1
1012:1017
ITPVST
FBXW7
0.9988
More...