DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
ITPYGE
Uniprot ID:
Q9BV94
Source protein:
ER degradation-enhancing alpha-mannosidase-like protein 2
Source gene:
EDEM2
Class:
LIG_APCC_ABBA_1
Location:
458:463
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.5369
ASA_SCORE:
65.5333
COIL:
0.6177
CONS_SCORE:
0.3387
DSS_SCORE:
0.0463
HELIX:
0.0328
FCONS_SCORE:
0.7485
RIG_SCORE:
0.912
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G462V
TCGA-29-1777
OV
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.6421
p.G462V
DO28071
OV
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.6421
p.G462R
TCGA-29-1777
OV
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.6457
p.G462R
DO28071
OV
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.6457
p.I472M
TCGA-50-6590
LUAD
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.I472M
TCGA-VS-A8QM
CESC
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.I472M
DO51631
CESC
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.I472M
DO24692
LUAD
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.T459N
TCGA-AA-3852
COAD
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.5944
p.T459N
DO8471
COAD
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.5944
p.P460S
TCGA-BF-AAOX
SKCM
TCGA
ITPYGE
LIG_APCC_ABBA_1
0.6752
p.P460S
DO223907
SKCM
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.6752
p.A456T
DO228483
BRCA
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.2778
p.A456T
DO229010
COCA
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.2778
p.A456T
DO229473
LAML
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.2778
p.A456T
DO231140
LAML
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.2778
p.A456T
DO228947
LICA
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.2778
p.Y471S
DO229293
LMS
ICGC
ITPYGE
LIG_APCC_ABBA_1
0.1111
p.W459C
22RV1
prostate
COSMIC
ITPYGE
LIG_APCC_ABBA_1
0.7
p.K472N
MEG-01
haematopoietic_and_lymphoid_tissue
COSMIC
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.K472N
U-266
haematopoietic_and_lymphoid_tissue
COSMIC
ITPYGE
LIG_APCC_ABBA_1
0.0833
p.C451F
HARA
lung
COSMIC
ITPYGE
LIG_APCC_ABBA_1
0.1389
Drug responses associated with EDEM2 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of ITPYGE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BV94
ER degradation-enhancing alpha-mannosidase-like protein 2
LIG_APCC_ABBA_1
458:463
ITPYGE
APC,CDC20,FZR1
0.5369
More...