DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IVPFSE
Uniprot ID:
P42166
Source protein:
Lamina-associated polypeptide 2, isoform alpha
Source gene:
TMPO
Class:
LIG_APCC_ABBA_1
Location:
203:208
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9672
ASA_SCORE:
98
COIL:
0.8668
CONS_SCORE:
0.491
DSS_SCORE:
0.5632
HELIX:
0.0442
FCONS_SCORE:
0.9086
RIG_SCORE:
0.767
Degron related mutations and impact score
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Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.G204C
DO229035
LICA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.76
p.A206G
SIDM02068
Esophageal Carcinoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.754
p.I203S
SIDM00845
Burkitt's Lymphoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.7341
p.R205K
SIDM00660
Colorectal Carcinoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.7237
p.R205K
ACH-000985
Colon/Colorectal Cancer
CCLE
IVPFSE
LIG_APCC_ABBA_1
0.7237
p.R205K
LS-411N
large_intestine
COSMIC
IVPFSE
LIG_APCC_ABBA_1
0.7237
p.E208K
TCGA-AR-A2LE
BRCA
TCGA
IVPFSE
LIG_APCC_ABBA_1
0.7022
p.E208K
DO1932
BRCA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.7022
p.I203F
SIDM00845
Burkitt's Lymphoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.6304
p.P209Q
DO14766
HNSC
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.3056
p.P209Q
DO28923
OV
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.3056
p.R201G
TCGA-AG-3906
READ
TCGA
IVPFSE
LIG_APCC_ABBA_1
0.2778
p.R201G
DO36491
READ
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.2778
p.T200A
SIDM00845
Burkitt's Lymphoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.25
p.T200A
SIDM00461
Acute Myeloid Leukemia
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.25
p.T200A
SIDM01519
Head and Neck Carcinoma
GDSC
IVPFSE
LIG_APCC_ABBA_1
0.25
p.S199C
TCGA-BT-A3PK
BLCA
TCGA
IVPFSE
LIG_APCC_ABBA_1
0.2222
p.S199C
DO44051
BLCA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.2222
p.P213S
TCGA-EE-A29E
SKCM
TCGA
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213S
DO222504
MELA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213S
DO222843
MELA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213S
DO37831
SKCM
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213L
TCGA-FR-A8YC
SKCM
TCGA
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213L
DO50301
SKCM
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.1944
p.P213A
DO222875
MELA
ICGC
IVPFSE
LIG_APCC_ABBA_1
0.1944
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Drug responses associated with TMPO mutations
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Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
No data available in table
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All proteins holding degron of IVPFSE
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Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P42166
Lamina-associated polypeptide 2, isoform alpha
LIG_APCC_ABBA_1
203:208
IVPFSE
APC,CDC20,FZR1
0.9672
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