DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IYIYNE
Uniprot ID:
Q8N1F7
Source protein:
Nuclear pore complex protein Nup93
Source gene:
NUP93
Class:
LIG_APCC_ABBA_1
Location:
189:194
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.7044
ASA_SCORE:
46.1167
COIL:
0.1363
CONS_SCORE:
0.3915
DSS_SCORE:
0.0825
HELIX:
0.8398
FCONS_SCORE:
1.0744
RIG_SCORE:
0.9246
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.V197L
TCGA-55-5899
LUAD
TCGA
IYIYNE
LIG_APCC_ABBA_1
0.25
p.V197E
TCGA-A5-A0G5
UCEC
TCGA
IYIYNE
LIG_APCC_ABBA_1
0.25
p.R187W
TCGA-ZF-A9R7
BLCA
TCGA
IYIYNE
LIG_APCC_ABBA_1
0.2778
p.A197V
DO8842
COAD
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.25
p.A197V
DO41644
UCEC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.25
p.E191K
DO49070
HNSC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.7022
p.E191K
DO26775
LUSC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.7022
p.G184V
DO229018
LICA
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.1944
p.V195L
DO229008
LICA
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.3056
p.Y201C
DO51778
STAD
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.1389
p.P183S
DO41999
UCEC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.1667
p.R204C
DO43875
UCEC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.0556
p.R204C
DO41199
UCEC
ICGC
IYIYNE
LIG_APCC_ABBA_1
0.0556
p.R204C
LS-411N
large_intestine
COSMIC
IYIYNE
LIG_APCC_ABBA_1
0.0556
p.Y192C
SIDM01140
Ovarian Carcinoma
GDSC
IYIYNE
LIG_APCC_ABBA_1
0.7087
p.Y192C
ACH-001374
Ovarian Cancer
CCLE
IYIYNE
LIG_APCC_ABBA_1
0.7087
p.Y192C
PA-1
ovary
COSMIC
IYIYNE
LIG_APCC_ABBA_1
0.7087
p.P179S
LIM1215
large_intestine
COSMIC
IYIYNE
LIG_APCC_ABBA_1
0.0556
p.G192A
SIMA
autonomic_ganglia
COSMIC
IYIYNE
LIG_APCC_ABBA_1
0.754
Drug responses associated with NUP93 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IYIYNE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q8N1F7
Nuclear pore complex protein Nup93
LIG_APCC_ABBA_1
189:194
IYIYNE
APC,CDC20,FZR1
0.7044
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