DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
IYPYSD
Uniprot ID:
Q9BQK8
Source protein:
Phosphatidate phosphatase LPIN3
Source gene:
LPIN3
Class:
LIG_APCC_ABBA_1
Location:
200:205
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.9929
ASA_SCORE:
64.0667
COIL:
0.8392
CONS_SCORE:
0.2685
DSS_SCORE:
0.6322
HELIX:
0.083
FCONS_SCORE:
1.0141
RIG_SCORE:
0.6865
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.E207K
TCGA-59-2349
OV
TCGA
IYPYSD
LIG_APCC_ABBA_1
0.2778
p.E207K
DO28621
OV
ICGC
IYPYSD
LIG_APCC_ABBA_1
0.2778
p.I200V
TCGA-BR-7197
STAD
TCGA
IYPYSD
LIG_APCC_ABBA_1
0.5965
p.I200V
DO38839
STAD
ICGC
IYPYSD
LIG_APCC_ABBA_1
0.5965
p.D200A
SIDM01265
Plasma Cell Myeloma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00672
Hepatocellular Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00773
Non-Cancerous
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00087
Plasma Cell Myeloma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00633
Breast Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00844
Burkitt's Lymphoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00793
Burkitt's Lymphoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM00774
Breast Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.D200A
SIDM01664
Prostate Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.7793
p.E191K
SIDM01090
Colorectal Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.0833
p.E191K
SIDM00956
Esophageal Squamous Cell Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.0833
p.E191K
SIDM00755
Non-Small Cell Lung Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.0833
p.Q197R
SIDM00554
Ovarian Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.25
p.Q197R
SIDM01660
Kidney Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.25
p.Q197R
SIDM01622
Breast Carcinoma
GDSC
IYPYSD
LIG_APCC_ABBA_1
0.25
Drug responses associated with LPIN3 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of IYPYSD
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q9BQK8
Phosphatidate phosphatase LPIN3
LIG_APCC_ABBA_1
200:205
IYPYSD
APC,CDC20,FZR1
0.9929
More...