DegronMD: protein-targeted degradation, mutation and drug response to degrons
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Degron:
KAETTPLK
Uniprot ID:
Q5T5J6
Source protein:
Transcriptional protein SWT1
Source gene:
SWT1
Class:
DEG_SCF_SKP2-CKS1_1
Location:
555:562
E3 ligase:
SKP2,CSK1
DEGRON score:
0.8001
ASA_SCORE:
98.2375
COIL:
0.7394
CONS_SCORE:
0.3636
DSS_SCORE:
0.4645
HELIX:
0.2336
FCONS_SCORE:
1.1364
RIG_SCORE:
0.7484
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.P547S
TCGA-2W-A8YY
CESC
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1111
p.P547S
DO223732
CESC
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1111
p.K566N
TCGA-D3-A2JC
SKCM
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.3333
p.K566N
DO47578
SKCM
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.3333
p.K566M
TCGA-DD-AADF
LIHC
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.3333
p.K566M
DO52232
LIHC
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.3333
p.K555R
TCGA-EC-A24G
UCEC
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.6126
p.K555R
DO40996
UCEC
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.6126
p.P550H
TCGA-IB-7651
PAAD
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.P550H
DO46657
PAAD
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.I549V
TCGA-VQ-A8P2
STAD
TCGA
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1667
p.I549V
DO51761
STAD
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1667
p.K566E
DO222363
MELA
ICGC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.3333
p.E568D
SIDM00683
Prostate Carcinoma
GDSC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1667
p.E568D
ACH-000977
lymph_node
CCLE
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1667
p.E568D
LNCaP-Clone-FGC
prostate
COSMIC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1667
p.P550S
SIDM00003
Melanoma
GDSC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.P550S
ACH-000884
Skin Cancer
CCLE
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.P550S
ACH-002159
Skin Cancer
CCLE
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.P550S
M14
skin
COSMIC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1944
p.S569F
SIDM01619
Endometrial Carcinoma
GDSC
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1389
p.S569F
ACH-000984
Endometrial/Uterine Cancer
CCLE
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.1389
p.S572F
ACH-001991
Primary
CCLE
KAETTPLK
DEG_SCF_SKP2-CKS1_1
0.0556
Drug responses associated with SWT1 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KAETTPLK
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
Q5T5J6
Transcriptional protein SWT1
DEG_SCF_SKP2-CKS1_1
555:562
KAETTPLK
SKP2,CSK1
0.8001
More...