DegronMD: protein-targeted degradation, mutation and drug response to degrons
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BSML
CPH
CGC
Degron:
KARIHAE
Uniprot ID:
P40818
Source protein:
Ubiquitin carboxyl-terminal hydrolase 8
Source gene:
USP8
Class:
LIG_APCC_ABBAyCdc20_2
Location:
462:468
E3 ligase:
APC,CDC20,FZR1
DEGRON score:
0.849
ASA_SCORE:
85.7714
COIL:
0.0347
CONS_SCORE:
0.4434
DSS_SCORE:
0.4725
HELIX:
0.9646
FCONS_SCORE:
1.0159
RIG_SCORE:
0.7838
Degron related mutations and impact score
Mutation
Sample
Cancer
Dataset
Degron
Degron class
Impact score
p.K462N
TCGA-FI-A2D5
UCEC
TCGA
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.6918
p.K462N
DO41331
UCEC
ICGC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.6918
p.E468K
TCGA-XF-AAMY
BLCA
TCGA
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E468K
DO219050
BLCA
ICGC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.7022
p.E460K
DO227855
COCA
ICGC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.2778
p.R464C
DO234278
ESAD
ICGC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.719
p.R464C
SIDM00122
Breast Carcinoma
GDSC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.719
p.R464C
BT-549
breast
COSMIC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.719
p.S452Y
SIDM00678
Bladder Carcinoma
GDSC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.5
p.S452Y
HT-1376
urinary_tract
COSMIC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.5
p.M456V
SIDM00661
B-Cell Non-Hodgkin's Lymphoma
GDSC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.M456V
HT
haematopoietic_and_lymphoid_tissue
COSMIC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.1667
p.R467T
ACH-000345
Neuroblastoma
CCLE
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.7876
p.R467T
KP-N-RT-BM-1
autonomic_ganglia
COSMIC
KARIHAE
LIG_APCC_ABBAyCdc20_2
0.7876
Drug responses associated with USP8 mutations
Sample
Cancer
Mutation (In Degron?)
Dataset
Drug
IC50
All proteins holding degron of KARIHAE
Uniprot ID
Source protein
Degron class
Location
Hit
E3 ligase
Degron score
Detail
P40818
Ubiquitin carboxyl-terminal hydrolase 8
LIG_APCC_ABBAyCdc20_2
462:468
KARIHAE
APC,CDC20,FZR1
0.849
More...